Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1810 ATGCTCTTTCGGAGCAAATTTCTTAGCTTTGCTCCGCCAAAACCCTTGATTCGTCATCATTCGTTTCAGTTGGTCAACCACATTCTGGTATCAGAGTATTTGGATCGCTATGGCACCCAAGAAAAGTTCCTTGCTAAAGTTTCCGGTCTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACTCAAGAGAAAAATGGACATTCAGATGATGCCTCAAGAAGTCCAGAACTCCTGCAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAACTTCTACGGACATGCTTTGATAAAGACAAAAAGAACACTTCGGCAAAAGGCAGGGTGACTGAAAATAATTCAAGCATGCAGAAATTGCAGCTTTTGCCATCTCTTATCTCTCTTGAGCTGGGAAATGAACTTCACTATGGCCTTGCTGTGTTTTTGTTCGATAATGAACTGCTAAGTATAGCAAAAGATGCCCGGCGTGTAGATGTACTCTGTTATAGAATATATTTGAGCTACAGGCTTCTAGATGGGACTTCCAGGTTTAAAGAACTCCATGAGATTGTGCAAGAGGCAAAGGCTAAACTGGAAACAGAAGTTGGTCCAGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTATTGCCAGTGATGTGCAGAAACTGTGCTCCCTAGCTGTTGAGAAAGCTGATGAGTGGCTGGCCTCTGTTTCCAATGCAAATCCAGATTCCAGAGAGGGTTCACTCCCTGCTGCCTGCAAGTTTGTTTTTGAAGAGGTCACAGCTTCCTCAGTCAAAATCATTTTGATCGAAATGTCTAATTCATCTTCTGAGGACATCAAAGGTTTCAAGCTCTGGTATTACAAGAGTGGGGAGGAATTGCACACTAAAGATCCTGTTTGTGTTTTCCCGATATCCCAGAGGAGGATTCTGATATCAAACCTCCAACCTTGCACAGAATATACATTTCGGATTGTATCTTACACAGATACATGTGATCGGGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAGAAATCCTTCTTCGTTAGCTGCTTTGAATCATAACAAAGAGAACCATAAAACTGGAGGGACTTCTTCTGATCCAAAAAGGGAACCCAATCCCACAATGGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAGTTCTGCGCCTTGCTTGGGCTCAAGAACAAGGTTGCTTTGAGGGGTTTTGCTGTGCTGATGTGAAAAATTGCTGTGGAGGAAGTGAAATGGTCAGGCCTAAATATTCAGAAGAGACATTGCCTAAAGTTTCAAAAGGCCTTGATTTAAATGTTGTTTCGGTTCCTGACTTAAATGAAGAATTAACGCCACCTTTTGAGTCTTCTAGGGATGAAGATAACGGTTGTACCTTGCAGCAGGCTATCGGGGCTGATGACGATGCTGCTTCTCATGATATTGAGAAGATTGGTTTAGCGAGATCCCATGGCAGTGGTGACTCGCAAACCGGGGCCCACAGGCCAACCGGTGAAGTGCCAGCTGTTGACTCACGCGTACATGCCGCCACATGCAGGAAAAGATTAGCAAGCACAAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGATCTCCTTTACGCATTTCCGATGGATCTTGTTCCCTGGATGAGAACTTTGAGTATTGCGTGAAAGTAATTCGATGGCTAGAGTGTGAGGGCCACATTAAGCAGGAATTCCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACGGAGCAAGAGCGTAGGGTGGTCAACACCTATATTCAAACTCTGATTGATGACCCTGGTAGTTTGGCTGGACAACTTCTTGACTCCTTTTCTGATATTATATCTAACAAGAGGCCAAGAAATGGATTCTGTGGCAAATTTGTCTGGCGAAATGGATATGCATTGATGATTACAGAGACAGCAACTCATTTTTAG 1968 0.4339 MLFRSKFLSFAPPKPLIRHHSFQLVNHILVSEYLDRYGTQEKFLAKVSGLQSLSSSVQSTQEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKKNTSAKGRVTENNSSMQKLQLLPSLISLELGNELHYGLAVFLFDNELLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAVEKADEWLASVSNANPDSREGSLPAACKFVFEEVTASSVKIILIEMSNSSSEDIKGFKLWYYKSGEELHTKDPVCVFPISQRRILISNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRRNPSSLAALNHNKENHKTGGTSSDPKREPNPTMADSGFKVRDLGKVLRLAWAQEQGCFEGFCCADVKNCCGGSEMVRPKYSEETLPKVSKGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAIGADDDAASHDIEKIGLARSHGSGDSQTGAHRPTGEVPAVDSRVHAATCRKRLASTNEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPGSLAGQLLDSFSDIISNKRPRNGFCGKFVWRNGYALMITETATHF 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1810 655 MobiDBLite consensus disorder prediction 491 516 - -
Lele07g1810 655 CDD FN3 252 328 IPR003961 GO:0005515
Lele07g1810 655 SUPERFAMILY Fibronectin type III 254 336 IPR036116 GO:0005515
Lele07g1810 655 ProSiteProfiles Fibronectin type-III domain profile. 247 346 IPR003961 GO:0005515
Lele07g1810 655 MobiDBLite consensus disorder prediction 357 383 - -
Lele07g1810 655 Gene3D Immunoglobulins 233 338 IPR013783 -
Lele07g1810 655 PANTHER VIN3-LIKE PROTEIN 2-RELATED 145 638 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1810 Lele-ChrLele07 11406170 11413054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1810 146 633 PHD Gene Family AT3G24440 46.016 6.46e-122 373