Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1807 ATGCTCGTTTTGTTCTTCTTAGGCAATTGTTTAGTCTTCAGATCTGTGGTGGAGATGGAAAACCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTCGGGGCCTTCTGAAACTTCAAGAGAATCGCAGATGTATTAATTGCGGCAGCCTGGGACCGCAATATGCGTGCACAAATTTTTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGAGAATTCACACATCGAGTTAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCGAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGATAGCGGTAATATTGACCGGCTTCGGGACTTTATCAAGCATGTTTATGTGGATAGACGATATAGTGGTGAGAGGACCTATGACAAACCACCAAGAGTTGAGGCATATCAAGGAGGATCTAAAAGCCCACCGTATGAGGATGCATATGAACGTCGTTACAGTGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTATAGGAAAAGCCCAGGTCGTCCGCCGATAATCAATGATTGGCGTCGTGAAGATAGATTTGGAGATGGAAGAAGATTTGAAGATCGTAGAACATCTGATGGAGATTATAAGCTGGAAGGCCAATCGCCCGAGCAAGTAAAAGATCATGATTCTTCAAGTTCACCTGTTGTACGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTGCCTCTACGAATAAGTGAACCCCCCAAAACAAACAGTGGAAAGGCTGCTGATGGCTCTACACTTACACTCACACAGAGAACTGCATCTTCCAGTAGCCTAGTATCTAGTAATGGAAATGCAGCGGTAGTTAAGCTTGAGACGACTAAGAGCCTTATTGATTTTGACACTGAGCCCGAACCTCCTGTTGCTCCAGCAAATCCTCAAGCTCAACCAACTACTGCTGTCCAGTCTACTGTGCAACCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAAGCTACCCAAGGTCCTTCAAATTTAAGTCCACTTGACTCTGTTCTCTCACAACTATCAATGCCATCACCTGTCCCTGCCCCTGCTCAGGTCTCTGAAGTTCAAGGGCCTCTGCCAGCATCAGCTGCCACTGCTACTGGAGCTGGAACTTTTGGCAACTTCTCACCAGTGCCGCCAAGTGGTACTTCTGTAACAGCCCCTGGATTGACAACAGCGCTGCCAATCAACGATGCAGGCCGGTGGGCCAGTGTGCAACACAACCAACCCGTGTTCCCTACCACTGGTAGTCATCCTGCTACTCAACAATTCATTCCGTCAGCAGGCGGATCTTTGAATAGTCAGCAGTGGAGTGTATCGCCAGTGCCCACAATGCAAGGGCACCCTAGCATACAAATGCCACATTCATTCCCTGTTGCCTCAAAACCTACCAATGAGGTTAGCTCTAGCGCTGCTTCACAACCTTCAAAAGAAGTGCAACCAAGTGGAAGAAAAGAACTCCCTGAGGATCTCTTCACTCTAAAGTATTCATCCTTCACTTCTCTGGCTCCAGGGTGGCAAATGGGTCCTCCCCAGGGCATGGGTATCTATATGCAATATAATACTGCAGCGCCCATGCCAAGTTTTCCACAGCCATCAAAATCAACAAATCCATTTGATGTCAGCAGAGATGCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTGGACCGCCTTCTTCAGGTGTAATACACCCCCCAAGCCTGGGTAATATATCCCTTTCCTGGAGCTCACCCCAGTCATCATATGGTTCAGTACTTCCTCCACAAGCTCATGTTCATGCACCTGCAATGGCACCAAGGCCATACATGGGGCAACAAGTGCCAACTAACATGCCAATGCCTAGGCATCAGGAAATTGGGAATTCTGGCACACAGGGAGCTGCTGTTGGCTTTTCTAATCCAGATCAGCAGATAACTGGTATGTTCTCAACCCCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGATGA 2130 0.4671 MLVLFFLGNCLVFRSVVEMENRLKEDEKNERIIRGLLKLQENRRCINCGSLGPQYACTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSGNIDRLRDFIKHVYVDRRYSGERTYDKPPRVEAYQGGSKSPPYEDAYERRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDGRRFEDRRTSDGDYKLEGQSPEQVKDHDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKAADGSTLTLTQRTASSSSLVSSNGNAAVVKLETTKSLIDFDTEPEPPVAPANPQAQPTTAVQSTVQPANSSDDNWASFDVAPAAKATQGPSNLSPLDSVLSQLSMPSPVPAPAQVSEVQGPLPASAATATGAGTFGNFSPVPPSGTSVTAPGLTTALPINDAGRWASVQHNQPVFPTTGSHPATQQFIPSAGGSLNSQQWSVSPVPTMQGHPSIQMPHSFPVASKPTNEVSSSAASQPSKEVQPSGRKELPEDLFTLKYSSFTSLAPGWQMGPPQGMGIYMQYNTAAPMPSFPQPSKSTNPFDVSRDAPPVQAPTFPSMSSLQGALPSGPPSSGVIHPPSLGNISLSWSSPQSSYGSVLPPQAHVHAPAMAPRPYMGQQVPTNMPMPRHQEIGNSGTQGAAVGFSNPDQQITGMFSTPAAANSFSAGGNPFG 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1807 709 MobiDBLite consensus disorder prediction 384 404 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 331 353 - -
Lele07g1807 709 FunFam Arf-GAP domain and FG repeat-containing protein 1 19 153 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 203 240 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 448 520 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 591 605 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 568 615 - -
Lele07g1807 709 ProSiteProfiles ARF GTPase-activating proteins domain profile. 30 148 IPR001164 GO:0005096
Lele07g1807 709 SUPERFAMILY ArfGap/RecO-like zinc finger 29 141 IPR037278 -
Lele07g1807 709 PANTHER ARFGAP/RECO-RELATED 19 709 IPR044820 GO:0005096
Lele07g1807 709 SMART arf_gap_3 30 148 IPR001164 GO:0005096
Lele07g1807 709 CDD ArfGap_AGFG 30 140 - -
Lele07g1807 709 Gene3D Arf GTPase activating protein 19 149 IPR038508 -
Lele07g1807 709 MobiDBLite consensus disorder prediction 448 525 - -
Lele07g1807 709 MobiDBLite consensus disorder prediction 145 284 - -
Lele07g1807 709 PRINTS HIV Rev interacting protein signature 79 100 IPR001164 GO:0005096
Lele07g1807 709 PRINTS HIV Rev interacting protein signature 61 78 IPR001164 GO:0005096
Lele07g1807 709 PRINTS HIV Rev interacting protein signature 42 61 IPR001164 GO:0005096
Lele07g1807 709 MobiDBLite consensus disorder prediction 317 353 - -
Lele07g1807 709 Pfam Putative GTPase activating protein for Arf 31 141 IPR001164 GO:0005096
Lele07g1807 709 MobiDBLite consensus disorder prediction 568 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1807 Lele-ChrLele07 11369959 11375518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1807 30 163 C2H2 Transcription Factor Family AT4G21160 29.286 5.74e-13 68.9