Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1782 ATGTCAAGCTCGCCGTCTCCCGGAGCTTCTCCGGCCCCCACATCGCCGCCGGCTACTAACACAACTTCTCCTCCTCGTCCCGCTACTAACACAACCTCTCCTCCTCCACCCTCGGCCACCCCTACTGCACCACCTCCTGCTACTCCCTCCACTCCACCACCGGCTACTCCTTCGCCTCCGCCACCATCCACGACCACTCCCAGCCCTCCGTCTCCCTCCCCACCTTTAACCTCTCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCGCCTCCGGTGACTCGGAGCTCGCCTCCTCCTCCGTCTGGTTCATCCACGCCTTCAACTCCGACTCGAAACCCGCCTCCACCGCCTTCGTCCCCTTCTTCGTCGCCGAATATATCAACTGGTGTTATTGTTGGAATCGCCGTTGCTGCTGTGGCGATTCTTGTAATTTTAAGTGTTGTATGCATATGTTGTCGGAGGAGGAAGAGGAGAACGAGTAATGCGGGATACTATGTCCCGCCACATGGACCTAAAGGTGACCAATATGGTGGCCCACCAAGTCAGTGGCAACATAATGCTCCCCCTCCTTCAGATAATGTTGTCTCCGTGATGCAAAAGCCCCCTCCACCGCCACCAGGTGCATCACGACCATCCCAATCACCAGCTTATGCCCCTAAACCTCCTCCGCCACCACTATTCCTGAGCAGCAGCGGCGGCTCAGGTTCCAACTATACAGGTGGCGAAAATCCACTCCCACCCCCTTCTCCTAGTATTGCATTGAGTTTCTCAAAGAGCATATTTTCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTTCTTGGACAAGGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAATATACTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTCGCGAAGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACCGACAAATCAGATGTTTTCTCCTTTGGAGTCATGCTCCTGGAGCTAACTACTGGACGTCGACCAGTTGACACGACTCATGCTTTCATGGAGGATAGTCTGGTAGACTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTGTGGTTGATCCAAGGCTCAAAGATGAATATGACCTCAATGAAATGACTCGCATGGTTGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATATGTCTCTATCAGATCTGAACGAAGGAGTTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTAGGCGTTAGCAGTGAATACAGTGGACGTACAAGTGACAACAGCTTATATCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCCAGACCACCCAGGAAATGGAAATGAGAAAGATGAATAACCTCCAAGGTTACAGTGGAAGCTCTTGA 1620 0.5142 MSSSPSPGASPAPTSPPATNTTSPPRPATNTTSPPPPSATPTAPPPATPSTPPPATPSPPPPSTTTPSPPSPSPPLTSPPPPTSGTNSPPPPVTRSSPPPPSGSSTPSTPTRNPPPPPSSPSSSPNISTGVIVGIAVAAVAILVILSVVCICCRRRKRRTSNAGYYVPPHGPKGDQYGGPPSQWQHNAPPPSDNVVSVMQKPPPPPPGASRPSQSPAYAPKPPPPPLFLSSSGGSGSNYTGGENPLPPPSPSIALSFSKSIFSYEELVRATDGFSDANLLGQGHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELTTGRRPVDTTHAFMEDSLVDWARPLLIRALEEHDFDSVVDPRLKDEYDLNEMTRMVACAAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGVKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSGRTSDNSLYPSGSSSEGQSRQTTQEMEMRKMNNLQGYSGSS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1782 539 MobiDBLite consensus disorder prediction 180 194 - -
Lele07g1782 539 SUPERFAMILY Protein kinase-like (PK-like) 285 441 IPR011009 -
Lele07g1782 539 Gene3D Transferase(Phosphotransferase) domain 1 272 453 - -
Lele07g1782 539 PRINTS Proline rich extensin signature 16 37 - -
Lele07g1782 539 PRINTS Proline rich extensin signature 38 54 - -
Lele07g1782 539 PRINTS Proline rich extensin signature 57 74 - -
Lele07g1782 539 PRINTS Proline rich extensin signature 4 16 - -
Lele07g1782 539 Pfam Protein kinase domain 286 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1782 539 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 138 283 - -
Lele07g1782 539 SMART serkin_6 143 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1782 539 MobiDBLite consensus disorder prediction 9 123 - -
Lele07g1782 539 FunFam proline-rich receptor-like protein kinase PERK8 266 455 - -
Lele07g1782 539 MobiDBLite consensus disorder prediction 196 229 - -
Lele07g1782 539 MobiDBLite consensus disorder prediction 493 539 - -
Lele07g1782 539 MobiDBLite consensus disorder prediction 162 247 - -
Lele07g1782 539 ProSiteProfiles Protein kinase domain profile. 127 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1782 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Lele07g1782 539 MobiDBLite consensus disorder prediction 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1782 Lele-ChrLele07 11202872 11206366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1782 284 522 Trihelix Transcription Factor Family AT1G70460 57.741 5.55e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele07g1782 Pkinase 1.2e-21 CL0016