Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1774 ATGTCGGGTATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACCCGAGCTGAGATTCTCGCCAAGTACCAAGTCATGGAGCGGGTGGGCTCTGGAGCTTACTCCGATGTCTACAAAGGCCGTCGTCTCTCCGATGGCCTCATCGTCGCCCTCAAAGAAGTTCATGATTACCAATCTGCTATCCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTGCCCTAACGCCGTTGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTCGAGTTTTTGAGAACTGACTTGTTGACGGTCATCAAAGAGGCCAAGAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGGTCCAGATTCTTTGCGGAGTCGATGCGTGCCACGCAAATATGATCATGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCGGAGGATGGTGTGCTGAAGTTGGCTGATTTTGGGCAGGCAAGGATACTTATGGAGCCTGGATTTCATGCTATGGATGAAAACCCATCACCTTATGAAGACGATGTTTCGAATAATGAGAGATCTCCTCAACATCCTGAAGTATTTCCTCAGACACGCGACCAAAGCCAAGAAGGCTATGGAAATCAAGAACAGGGAACTGTAACTCAAGATGAATATTATAGAGAATTGGAAGAGATAAAAGCTAAGAACTCCACAGATGACATGGATAAGGATACGAACTTCCAGGATGGGAATACATCTTGTCTTGCAACTTGCACAATAAGTGACATCGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGTCAGAGACAGTGAAGAAGATTGTCTCACAGCATGCGTTGGAACCCGATGGTACAGGGCTCCTGAACTGCTTTATGGATCAGGTGACTATGGGTTAGAGATTGATCTCTGGGCATTGGGCTGCATCTTCGCAGAACTCCTAACTCTGGAGCCCTTATTTCCTGGGGCAGGTGATATTGATCAGCTCAGTAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGTCTGGTTGTTCCAAGCTTCCTGATTATGAAAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTATCGAAGGCCGCCTGCCCAACCGATCCCAGGATGAAGTCTCTTTAGTGAAGAAACTGGTCTGTTATGATCCGGCTAGAAGAGCTACAGCAATGGAACTTCTCCAAGACAAGTTTTTTGGTGAAGAACCTCTTCCTGTACCTGTTTCTGAGCTGCGGGTTCCTTTGACAAAAACTTCACACGATGAAGACTATGGTCATAATCTCAATGATGTGGATTTCGATTCTGATTTTGAGGACTTCAACCCTGTGAAAGTCATCAGAACTGGTACCGGTTTTTCTATTCAATTTCCCTGA 1419 0.4679 MSGMDPPPKSWSIYTRAEILAKYQVMERVGSGAYSDVYKGRRLSDGLIVALKEVHDYQSAIREIEALQILQGCPNAVVLHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGAGLSVGEIKQWMVQILCGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAMDENPSPYEDDVSNNERSPQHPEVFPQTRDQSQEGYGNQEQGTVTQDEYYRELEEIKAKNSTDDMDKDTNFQDGNTSCLATCTISDIEDDFMKGSFTYEADVRDSEEDCLTACVGTRWYRAPELLYGSGDYGLEIDLWALGCIFAELLTLEPLFPGAGDIDQLSRIIDVLGNLNEEVWSGCSKLPDYEKISFTKVENPPGIEGRLPNRSQDEVSLVKKLVCYDPARRATAMELLQDKFFGEEPLPVPVSELRVPLTKTSHDEDYGHNLNDVDFDSDFEDFNPVKVIRTGTGFSIQFP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1774 472 MobiDBLite consensus disorder prediction 193 217 - -
Lele07g1774 472 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lele07g1774 472 FunFam Cyclin-dependent kinase F-1 14 108 - -
Lele07g1774 472 Gene3D Transferase(Phosphotransferase) domain 1 15 213 - -
Lele07g1774 472 Pfam Protein kinase domain 23 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1774 472 Pfam Protein kinase domain 282 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1774 472 ProSiteProfiles Protein kinase domain profile. 23 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1774 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lele07g1774 472 Gene3D Transferase(Phosphotransferase) domain 1 247 428 - -
Lele07g1774 472 PANTHER CELL DIVISION PROTEIN KINASE 22 420 - -
Lele07g1774 472 SUPERFAMILY Protein kinase-like (PK-like) 7 435 IPR011009 -
Lele07g1774 472 MobiDBLite consensus disorder prediction 174 217 - -
Lele07g1774 472 SMART serkin_6 23 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1774 Lele-ChrLele07 11128943 11130862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1774 7 472 Core Cell Cycle Gene Families AT4G28980 62.185 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lele07g1774 Pkinase 1.6e-32 CL0016