LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g1758	ATGGCTGAACTACCCAGCTCAGAGATAGAGACAAGCATTCACACTAACTGGTCTTCACTATCTCCATCGTCGTCGTCGTCGTCTTCATCATTGTCTCAGTGTTTACCAAACTCTGCATCTGAGCCATTAGCTGCAGAACAGAGGAAGCTGAAACGAGGCAGAGATAGCAGCAACAGCAAACACCCTGTGTACAGAGGAGTTCGAATGCGGGTGTGGGGCAAGTGGGTGTCGGAAATCCGGGAGCCCAGGAAGAAGAATCGGATCTGGCTCGGCACCTTCGCCACGCCGGAGATGGCGGCCCGTGCCCACGACGTGGCCGCGATGGCCATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAACTCGCGGGTTCTCTGCCCCGACCCGCTTCCAACTCGCCCAGAGACGTTCAGGCCGCTGCAGCTAAGGCGGCCGCCATGGAAGTATTCAGTCCCCCAACGGCGTCGCTCTCGTCTTTCTCCTCATCGTCCTCATTGGCAATGTCCACCTCCTCGGGAGACTCCTCCGGCTACCCGCTCACCCCGGAGGAGGAACTCGGCGAGATAGTGGAGCTACCGCCTTTGGGAAGCAGTTTTGAGTCGCCGGACCCGGGTAACGAATTGGTGTTTTTTGACCCGGTGGAGGGGTGGCTCTACCCTCACCCGTGGGATCACAGCATTTATGATGAAAAGGATTGTAGTGGTTATTTCCTTGGGGATGACACATTAATGCAAGCAGCAGAGAGTGGATTCGAGAGCTCCTTGTGGCAATATTAA	777	0.5598	MAELPSSEIETSIHTNWSSLSPSSSSSSSSLSQCLPNSASEPLAAEQRKLKRGRDSSNSKHPVYRGVRMRVWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAAMAIKGNSAILNFPELAGSLPRPASNSPRDVQAAAAKAAAMEVFSPPTASLSSFSSSSSLAMSTSSGDSSGYPLTPEEELGEIVELPPLGSSFESPDPGNELVFFDPVEGWLYPHPWDHSIYDEKDCSGYFLGDDTLMQAAESGFESSLWQY	258

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g1758	258	MobiDBLite	consensus disorder prediction	1	62	-	-
	Lele07g1758	258	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	34	197	-	-
	Lele07g1758	258	CDD	AP2	64	122	IPR001471	GO:0003700\|GO:0006355
	Lele07g1758	258	Gene3D	AP2/ERF domain	63	121	IPR036955	GO:0003700\|GO:0006355
	Lele07g1758	258	MobiDBLite	consensus disorder prediction	45	61	-	-
	Lele07g1758	258	SUPERFAMILY	DNA-binding domain	63	121	IPR016177	GO:0003677
	Lele07g1758	258	PRINTS	Ethylene responsive element binding protein signature	64	75	IPR001471	GO:0003700\|GO:0006355
	Lele07g1758	258	PRINTS	Ethylene responsive element binding protein signature	86	102	IPR001471	GO:0003700\|GO:0006355
	Lele07g1758	258	ProSiteProfiles	AP2/ERF domain profile.	63	120	IPR001471	GO:0003700\|GO:0006355
	Lele07g1758	258	MobiDBLite	consensus disorder prediction	8	40	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g1758	Lele-ChrLele07	10979266	10980042	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g1758	28	229	AP2-EREBP Transcription Factor Family	AT5G11590	60.664	2.83e-68	209

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Lele07g1758		AP2	1.4e-13	CL0081

Showing 1 to 1 of 1 entries