Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1745 ATGGATGACTTCTTTGTTTCTGAGGCCAATGACCCGGGCGCCATGGCCTCCCTGCACCCACCTCCCAACTACTCCTTCGATTTGGGGGCTTTCGACCTCGACGAGGCTCTCGCCTCTGCCGGCGATTCATGCCGGCGATTTGCCCAGTCTCAAAGCTTCGTGGCGACATTGCCGGTGGTTCAAGACATGGACGGCGATGCTGTTTGCTCGGTTTGCATGGAAGGCTTTGACTCCGACGAAAACAAACGAATACCCTGCGGCCACGTGTACCACTCAAGCTGCATCATCGCCTGGATCTCTCTCTGCAACTCTTGCCCCCTATGCCGCTCCCATATCTTCCTGCACTCCTCTAATTAA 357 0.5602 MDDFFVSEANDPGAMASLHPPPNYSFDLGAFDLDEALASAGDSCRRFAQSQSFVATLPVVQDMDGDAVCSVCMEGFDSDENKRIPCGHVYHSSCIIAWISLCNSCPLCRSHIFLHSSN 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1745 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 118 IPR013083 -
Lele07g1745 118 Pfam Ring finger domain 69 109 IPR001841 -
Lele07g1745 118 ProSiteProfiles Zinc finger RING-type profile. 69 109 IPR001841 -
Lele07g1745 118 SUPERFAMILY RING/U-box 61 115 - -
Lele07g1745 118 SMART ring_2 69 108 IPR001841 -
Lele07g1745 118 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 46 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1745 Lele-ChrLele07 10895667 10896023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1745 50 114 C3H Transcription Factor Family AT1G68180 38.571 8.13e-13 60.8