Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1741 ATGGGTTCCTCCGAAAAGGAAGTGTTAGAGAAGAAAGAGAAGAGTGGAAAAGAGAGATCTATAGCCATAATTTTCAGATATAGTGATTGGATTGATGTGGTTCTCATGGTAATGGGAGCTTTAGGTGCAATTGGAGATGGCATGTCCACCAACGTATTGCTCATATTTGTTAGCCGTATTATGAACAGCTTGGGTTATGGCAATAATAACCACCAAAATAGTGGCAATTTCATGGCCGAGGTCGAAAAGTGCAGTTTATATTTTGTCTACCTGGGATTAGCAGCCATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAGGCGAGAGGCAGGTTCTGAGAATTCGATACAAGTACTTGGAAGCTGTGCTGAGACAAGAAGTGGGTTTATTTGATTCCCAAGAAGCAACCACCTCAGAAATCATCAATACCATATCAAAGGACACTTCTCTCATCCAAGAGGTTCTCAGGGAAAAGGTACCCTTATTCTTTATGCACTCATCATCATTCATCTCAGGAGTTGCATTTTCTGCATACTTCTGTTGGAGGGTGACCTTAGCAGCATTCCCAACGCTGCTTTTGTTGATTATTCCTGGAATGCTTTATGGCAAGTTCCTTATCTATCTGTCAAAGAAGTCTTATAAGGAATATGGCAAAGCAAACACCATAGTTGAACAGGCTCTAAGCTCCATTAAAACCATATATTCCTTCACTGCTGAGAAGAGAATCATCCGCAAGTATTCAGCTATATTGGACGCAACTTCAAAGCTGGGAATCAAACAAGGCATAGCCAAGGGGCTTGCTGTAGGAAGCATGGGTCTGTCTTTTGCAATATGGGCTTTTCTTTCTTGGCATGGAAGCCGTTTGGTTATGTACAGAGCTCAAAGCGGTGGAAAAGTCTACGCAGCTAGCATCACCTTCATTATGAGTGGCCTATCACTTGGAGTGGTTCTTCCAGATCTCAAATACTTTACAGAAGCTTCTGTTGCAGCTTCACGCATATTTGAAGTGATTGATCGGATACCATCCATTGATGTTGAAGACACAAAAGGACTTGTGTTAGAACGCATAAGTGGGAAGCTAGAATTTGAGCATGTAAAATTCACATACCCTTCTCGTCCAGAAACACTTGTACTCAGAGATTTCAATCTCACAGTTGAAGCAGGCAAAACTGTTGCTTTGGTTGGTGCTAGTGGAAGTGGAAAATCCACTGCAATTGCATTGTTGCAGAGATTTTATGATGCCAATGAAGGTGTTGTGAGAATTGATGGTGAAGACATAAGAAGCTTACAGTTGAAATGGATAAGAGCGAAAATGGGGTTAGTTAGTCAAGAACATGCACTGTTTGGAACATCTATAAAAGAAAATATCATGTTTGGGAAACCAGATGCCACCATAGATGAAGTAATTGCTGCAGCCACTGCTGCTAATGCTCATAACTTCATAAGGCAGCTTCCTCAAGGTTATGAGACCAAGATTGGAGAAAAGGGGTCACTTCTATCAGGTGGACAAAAGCAGAGAATAGCCATTGCTAGAGCCATCATAAAGAATCCAGCAATTCTTCTACTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATCGCTTGTTCAAACTGCCCTTGATCAGGCCTCCATGGGAAGGACCACATTGGTTGTTGCCCACAAGCTATCTACTATTCGAAATGCGGATCTCATAGCAGTTGTCAATGGTGGCTGTGTCATTGAAACAGGAACACATAATGAACTCATAAACCGACCAAATGGCCATTATGCAAAACTAGCAAAACTACAGAGACAACTAAGCTGTGATGACCAAGAAAAAAAACCAGAAATGGGTATTTCTTCTGCTGCAAGAAGCAGTGCTGGTAGACCAAGCACTGCCAGGTCAAGCCCTGCCTTCTTCTTCCCAAAATCACCCTTGCCTAATTATGACGCCCCTTTAGATCCTGTGTCTTACCCTCCTCCTTCGTTTCGTCGTCTTCTTTCTTTGAATGCATCTGAATGGAAACAGGGTCTAATTGGAAGCTTCTCAGCTATGGCATCTGGCTCAGTTCAACCTATTTATGCCTTCACCGTTGGGGGTGTGATTTCCGCATTTTTTGTTGAAAGCCATGATGAAATGCGTCAAAGGATCAGGAATTACTGTTTTATTTTCTCGTTCCTTGCCCTTGCATCTATCATCCTCAATCTCATTCAGCACTATAATTTTGCTTATATGGGAGAGAAGTTAACGAAGAGGGTCAGATTGCGCATGCTAGAGAAGATCTTAACCTTCGAAACTGCTTGGTTTGAGGAAGAACAAAACTCCAGTGGAGCCTTATGCTCAAGGTTGAGCAATGAAGCTTCCATCGTGAAATCACTCGTTGCAGACCGAGTTTCTCTACTGGTACAAACCACTTCTGCCGTCACAATCGCCATGATCATAGGGCTCGTGGTTGCATGGAAGCTTGCTCTTGTTATGATAGCAGTTCAACCACTCACAATTCTCTGCTTCTACACAAGAAAAGTTTTGCTCTCCACACTCTCGACCAAATTCATCAAAGCTCAAAACCAAAGCACTCAAATTGCAGTGGAGGCAGTTTATAATCACAGAATAGTAACTTCATTCGGAAGCACCAGACTAATTCTGAAACTATTCGACGAGGCCCAGGAGGCACCGAGGAAGGAAGCGAGGAAGAAGTCATGGCTAGCCGGAATAGGGATGGGTTCTGCTCAGTGTCTAACTTTCATGTCATGGGCTTTGGATTTCTGGTTCGGAGGTACGTTGGTGCAAAAGGGAGAAATATCAGCCGGCGCTGTGTTCAAGACATTCTTCGTTTTGGTCAGCACCGGCAAAGTCATAGCCGACGCCGGAAGCATGACTTCCGACCTCGCCAAAACCTCCACAGCAATCGCCTCTGTCTTCGAAATCCTTGACCGCAAATCACTAATCCCCAAGGCTGGAGATGGAACTAGTGGATGTAAGTTGGAGAAGATGAGTGGGAAGATAGAAATGAAAAACGTTGATTTCGCATATCCAAGCAGGAAGGAGACTCCAATTCTGCGACAATTTTGCTTGGAGGTTAAAGCAGGAACGAGTATTGGACTAGTTGGCAAGAGTGGGTGTGGAAAATCAACAGTGATAGCTTTGATTCAAAGGTTTTACGAGCCTGAGAGAGGATATGTCAAAGTGGATGGTGTGGACATAAGGGAATTAGATGCACATTGGTACAGACAACACACAGCACTTGTAAGCCAAGAGCCCGTAATATTCTCAGGCACCATACGTGACAACATCTTGTTTGGCAAGCAAAACGCATCAGAAAATGAGGTGGTCGAGGCTGCAAGGGCAGCTAATGCTCACGAGTTCATCTCGTCACTGAAGGATGGATATGAAACGGAATGTGGGGAGAGGGGAGTGCAATTGTCTGGAGGACAGAAGCAGAGAATAGCGATTGCAAGAGCAATAATAAGGAACCCAACAATACTACTGCTAGATGAAGCGACGAGTGCTTTAGATGTACAATCAGAACAGATAGTGCAGGAAGCACTTGATAGGATTATGGTTGGGAGGACCACCATTGTTGTTGCTCATAGACTTAATACCATTAAGCATCTCGACTCCATTGCTTATCTTGCAGACGGCAAGGTTATAGAGCGAGGAACCTATGCCCGCCTAAGGCACATGAAAGGAGCCTTCTTCAACCTTTCCACCCATCAAACTTAG 3717 0.4385 MGSSEKEVLEKKEKSGKERSIAIIFRYSDWIDVVLMVMGALGAIGDGMSTNVLLIFVSRIMNSLGYGNNNHQNSGNFMAEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTGERQVLRIRYKYLEAVLRQEVGLFDSQEATTSEIINTISKDTSLIQEVLREKVPLFFMHSSSFISGVAFSAYFCWRVTLAAFPTLLLLIIPGMLYGKFLIYLSKKSYKEYGKANTIVEQALSSIKTIYSFTAEKRIIRKYSAILDATSKLGIKQGIAKGLAVGSMGLSFAIWAFLSWHGSRLVMYRAQSGGKVYAASITFIMSGLSLGVVLPDLKYFTEASVAASRIFEVIDRIPSIDVEDTKGLVLERISGKLEFEHVKFTYPSRPETLVLRDFNLTVEAGKTVALVGASGSGKSTAIALLQRFYDANEGVVRIDGEDIRSLQLKWIRAKMGLVSQEHALFGTSIKENIMFGKPDATIDEVIAAATAANAHNFIRQLPQGYETKIGEKGSLLSGGQKQRIAIARAIIKNPAILLLDEATSALDSESESLVQTALDQASMGRTTLVVAHKLSTIRNADLIAVVNGGCVIETGTHNELINRPNGHYAKLAKLQRQLSCDDQEKKPEMGISSAARSSAGRPSTARSSPAFFFPKSPLPNYDAPLDPVSYPPPSFRRLLSLNASEWKQGLIGSFSAMASGSVQPIYAFTVGGVISAFFVESHDEMRQRIRNYCFIFSFLALASIILNLIQHYNFAYMGEKLTKRVRLRMLEKILTFETAWFEEEQNSSGALCSRLSNEASIVKSLVADRVSLLVQTTSAVTIAMIIGLVVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFIKAQNQSTQIAVEAVYNHRIVTSFGSTRLILKLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWFGGTLVQKGEISAGAVFKTFFVLVSTGKVIADAGSMTSDLAKTSTAIASVFEILDRKSLIPKAGDGTSGCKLEKMSGKIEMKNVDFAYPSRKETPILRQFCLEVKAGTSIGLVGKSGCGKSTVIALIQRFYEPERGYVKVDGVDIRELDAHWYRQHTALVSQEPVIFSGTIRDNILFGKQNASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQIVQEALDRIMVGRTTIVVAHRLNTIKHLDSIAYLADGKVIERGTYARLRHMKGAFFNLSTHQT 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1741 1238 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1741 1238 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 676 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1741 1238 FunFam ABC transporter B family member 4 353 610 - -
Lele07g1741 1238 Gene3D - 353 602 IPR027417 -
Lele07g1741 1238 FunFam ABC transporter B family member 1 23 360 - -
Lele07g1741 1238 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Lele07g1741 1238 Gene3D ABC transporter type 1, transmembrane domain 24 967 IPR036640 GO:0005524|GO:0016020
Lele07g1741 1238 MobiDBLite consensus disorder prediction 608 633 - -
Lele07g1741 1238 CDD ABC_MTABC3_MDL1_MDL2 364 601 - -
Lele07g1741 1238 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Lele07g1741 1238 Pfam ABC transporter 1020 1167 IPR003439 GO:0005524
Lele07g1741 1238 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 336 - -
Lele07g1741 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1237 IPR027417 -
Lele07g1741 1238 CDD ABC_6TM_Pgp_ABCB1_D2_like 665 981 - -
Lele07g1741 1238 FunFam ABC multidrug transporter SitT 990 1238 - -
Lele07g1741 1238 Gene3D - 990 1238 IPR027417 -
Lele07g1741 1238 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Lele07g1741 1238 ProSitePatterns ABC transporters family signature. 1139 1153 IPR017871 GO:0005524|GO:0016887
Lele07g1741 1238 SUPERFAMILY ABC transporter transmembrane region 659 977 IPR036640 GO:0005524|GO:0016020
Lele07g1741 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 601 IPR027417 -
Lele07g1741 1238 Pfam ABC transporter transmembrane region 677 946 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1741 1238 Pfam ABC transporter transmembrane region 38 311 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1741 1238 PANTHER ABC TRANSPORTER B FAMILY 6 688 - -
Lele07g1741 1238 CDD ABC_MTABC3_MDL1_MDL2 1000 1237 - -
Lele07g1741 1238 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1236 IPR003439 GO:0005524
Lele07g1741 1238 SMART AAA_5 390 582 IPR003593 -
Lele07g1741 1238 SMART AAA_5 1027 1219 IPR003593 -
Lele07g1741 1238 FunFam Putative ABC transporter B family member 8 645 985 - -
Lele07g1741 1238 SUPERFAMILY ABC transporter transmembrane region 18 347 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1741 Lele-ChrLele07 10869921 10876040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1741 37 602 Calmodulin-binding Proteins AT2G36910 37.128 2.89e-106 363