Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1733 ATGCTCTGCTCTATGGGCTCTGACCCTGTACTCTCTATCTGTTTTGCTGCGCAAATGGGAAGAGCCACCCGGTGGTTGAAGAGCTTGTTTGGGATAAAGAAAGACAGAAACCATGTTTTGGAGGGAGAACTTAGAGATTTTTGTCTCAATCCAACCACTATACCACCAAACATCTCGCCTGCAGAAGCCGCTTGGCTTCAATCGTTCTACACAGAAACAGAGAAGCAGCAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACTGCAGCCGCCGCTGATGCAGCCGTAGCAGCCACTCAGGCTGCCGTGGCCGTGGTCAGGCTCACCAGCCATGGCAGAGGCACCATGTTCGGCAGTGGTGGACACGAGAGATGGGCTGCCGTTAAGATTCAAACAGTATTTAGGGGTTACTTGGCAAGAAAGGCACTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCACTTGTGAAAGGCTATTTAGTGAGGAAGCAAGCGACGGCAACATTGCATAGTATGCAAGCTCTTGTCAGAGCCCAAGCCACTGTGAGGTCTCAGAAAGCTCGCAGGCTCATGAACAGAGACAATGAAGCTTATAGATTTGAACCTCGAGCGCGAAGATCCAGGGAGAGATTTGACGACACTAGGAGGGAGTACACAGCACCGGTTCACAGCAGAAGGATGTCTTCTTCTTTTGATGCAACAATAAATAACTCTAACAGCTTCGATGGAAGTCCCAAGATATTGGAAGTGGACACTGGTAGGCCAAGATCGAGGTCTCGGAGGACCAACACTTCTTCAATTTCAGATTTTGGCGATGACCCACAATTCCAAGCACTTTCCTCTCCTCTTCCAGTCCCTTGTTGTCGTACCCCAGCTCGCCTTTCGATACCAGATTGTCACCGGAATCTGCAGGACTCCGACTGGGGGTTGACGGTGGAAGAATGCAGGTCGTGTACGGCACAGAGCACTCCTCGGTTCACCAATTCTTGTGGGTCGTTTAGTTGTAATTCTACGGCTTGCAGAAGCGTTTGCGCCGGCGATGGATTTTACCGGCAATACGGGAATTTCCCGAATTACATGGCGAAAACTCAGTCATTCAGGGCGAAATTGAGGTCTCACAGTGCTCCAAAGCAGAGACCTGAACCGAAGAGGAGGGTATCGTTGAACGAATTGATGGAGTGTAGGAGTAGTTTGAGCGGAGTTCGAATGCAGAGATCTTGCTCTCAGGTTCAAGAAGCCATTAGCTTCAAGAATGCAGTGATGGGTAAGCTCGAAAAGTCTGCAGAATTTGGAAGGGAAAGGAATAGTAACTACTGGCAGAGGAGATGGTGA 1332 0.4977 MLCSMGSDPVLSICFAAQMGRATRWLKSLFGIKKDRNHVLEGELRDFCLNPTTIPPNISPAEAAWLQSFYTETEKQQNKHAIAVAAATAAAADAAVAATQAAVAVVRLTSHGRGTMFGSGGHERWAAVKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKQATATLHSMQALVRAQATVRSQKARRLMNRDNEAYRFEPRARRSRERFDDTRREYTAPVHSRRMSSSFDATINNSNSFDGSPKILEVDTGRPRSRSRRTNTSSISDFGDDPQFQALSSPLPVPCCRTPARLSIPDCHRNLQDSDWGLTVEECRSCTAQSTPRFTNSCGSFSCNSTACRSVCAGDGFYRQYGNFPNYMAKTQSFRAKLRSHSAPKQRPEPKRRVSLNELMECRSSLSGVRMQRSCSQVQEAISFKNAVMGKLEKSAEFGRERNSNYWQRRW 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1733 443 Gene3D - 72 149 - -
Lele07g1733 443 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Lele07g1733 443 PANTHER IQ-DOMAIN 5-RELATED 19 390 - -
Lele07g1733 443 MobiDBLite consensus disorder prediction 236 275 - -
Lele07g1733 443 SMART iq_5 145 166 IPR000048 GO:0005515
Lele07g1733 443 SMART iq_5 122 144 IPR000048 GO:0005515
Lele07g1733 443 Pfam IQ calmodulin-binding motif 124 144 IPR000048 GO:0005515
Lele07g1733 443 Pfam IQ calmodulin-binding motif 150 164 IPR000048 GO:0005515
Lele07g1733 443 Pfam Protein of unknown function (DUF4005) 321 400 IPR025064 -
Lele07g1733 443 ProSiteProfiles IQ motif profile. 171 199 IPR000048 GO:0005515
Lele07g1733 443 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Lele07g1733 443 MobiDBLite consensus disorder prediction 259 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1733 Lele-ChrLele07 10785276 10787268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1733 19 403 IQD Protein Family AT3G16490 50.000 3.91e-93 285