Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1729 ATGAAGACCAAGACGCCATTAAAGCAACTCAAGCTCGCTGTTCCTGCTCAAGAAATCCCCATCTCCTCATTCCTTTTTACACTCATTTCTGGAATTCGGACTAATTACGATGAAATGACTGAACTTAAGCACTTTCTTTCCTCAGAATGTGAAGAGTTTGAAATCGATTTCTTCTTATGGACTGCAAGTGGCACATTTCATGATGGAGATCTGCTTTTAAACCAGAGAGGATTGCGCCTTATATCAGAAGAAAGAGAATCGCGGCCTTCCGATGGTAAGGAACTTTATTTTGACTTCACACTGGAAGACCTTGAGACCATCAAAGTGATTGGAAAGGGCAGTGGTGGTGTAGTACAACTTGTTCGCCATAAGTGGGTTGGAAAATTATTTGCCTTGAAGGTTATTCAGATGAACATACAAGAGGAAATTAGAAAACAGATTGTTCAGGAGCTGAAGATTAACCAAGCATCACAGTGTCCACATGTTGTAGTTTGTTACCACTCCTTCTACCATAATGGAGCCATATCTCTTGTGTTAGAATACATGGATCGTGGTTCTCTAGCGGATTTAATCAGACAAGTTAAAACAATTTTGGAACCATATCTTGCAGTTGTTTGTAAGCAGGTCTTGCAAGGTCTTGTTTACTTGCATCATGAAAGACATGTAATTCATAGGGACATCAAACCGTCCAATCTGTTAGTAAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTTGGAACATACAACTATATGTCGCCAGAAAGAATCAGTGGGAGTACTTATGATTATAGCAGCGACATCTGGAGTTTGGGCCTGGTGGTACTTGAGTGTGCCATAGGGCGTTTTCCTTATATACAATCTGAAGATCAGCAAAGTGGGCCTAGCTTTTATGAGCTTTTGGAAGCAATCGTGGAAAGCCCACCACTTTCTGCTCCGTCAGATCAGTTCTCTCCAGAGTTCTGTTCATTTGTGTCATCCTGCATACAAAAGGATCCACGTGATAGATTGACATCCTTGGAGCTTCTGAGTCATCCTTTCATAAAAAAGTTTGAAGACAAGGATTTAGATCTTGAGATTCTGATAAGAGACAAAGCAAGATCTTCATCTTCTCCTCCATTTTGTCTCTGTAATTGTTGTTCTTCTTCTTCTTCCTGGCCACTAATGGATCAGAAGCCAAATCAAATCTTTCTGGGAATGAACATGAACTGCAACTGGGTTGTCAAGGAAGATGATGATCATGATACTTGTGAGTCATCATCCATTGGATCCGTCTCAGAAGATTCAACAGGTTCTGTGTGTTGTTCATCTTCTTCATCAGAATTAACGGAGGAAGCATCATCATCTTCTTCAACAAATAATCTGTCAACCTCAGCTTCATCGTCACGTTCAAATGGGCCTTTATATGAAATATCAGAGCTCATGACTCATCTTCCAATCAAGAGAGGACTCTCAATGTTTTATCAAGGGAAGGCTCAGTCCTTCACGTCCTTAGATAGGGTACAGAGCTTAGAAGATCTTCCTAAGAAATGCCCTCCTTACAGGAAGAAGATGAAGTCATGTAAAAGCTTTGGAGATGATTTGGATCATAGCCACAAGAACATATCATATTCTCCAAAGGCTACAATATCAAAGAGAGCTTCCATTAATAGAAGAGGCAGTTTCCTGGGAATTCATAGGCCTTCCTCCAATGCTGCACAAAGAAACTCATAA 1761 0.406 MKTKTPLKQLKLAVPAQEIPISSFLFTLISGIRTNYDEMTELKHFLSSECEEFEIDFFLWTASGTFHDGDLLLNQRGLRLISEERESRPSDGKELYFDFTLEDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGAISLVLEYMDRGSLADLIRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGLVVLECAIGRFPYIQSEDQQSGPSFYELLEAIVESPPLSAPSDQFSPEFCSFVSSCIQKDPRDRLTSLELLSHPFIKKFEDKDLDLEILIRDKARSSSSPPFCLCNCCSSSSSWPLMDQKPNQIFLGMNMNCNWVVKEDDDHDTCESSSIGSVSEDSTGSVCCSSSSSELTEEASSSSSTNNLSTSASSSRSNGPLYEISELMTHLPIKRGLSMFYQGKAQSFTSLDRVQSLEDLPKKCPPYRKKMKSCKSFGDDLDHSHKNISYSPKATISKRASINRRGSFLGIHRPSSNAAQRNS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1729 586 FunFam Mitogen-activated protein kinase kinase 6 185 383 - -
Lele07g1729 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Lele07g1729 586 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 62 453 - -
Lele07g1729 586 Gene3D Phosphorylase Kinase; domain 1 73 183 - -
Lele07g1729 586 ProSiteProfiles Protein kinase domain profile. 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1729 586 FunFam Mitogen-activated protein kinase kinase 6 74 183 - -
Lele07g1729 586 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Lele07g1729 586 Gene3D Transferase(Phosphotransferase) domain 1 185 388 - -
Lele07g1729 586 CDD PKc_MAPKK_plant_like 102 368 - -
Lele07g1729 586 MobiDBLite consensus disorder prediction 461 482 - -
Lele07g1729 586 SUPERFAMILY Protein kinase-like (PK-like) 101 365 IPR011009 -
Lele07g1729 586 Pfam Protein kinase domain 105 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1729 586 SMART serkin_6 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1729 Lele-ChrLele07 10755917 10762889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1729 1 378 MAP Kinase Kinase Gene Family AT5G56580 78.364 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele07g1729 Pkinase 1.1e-66 CL0016