Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1722 ATGAAGATTGAGCAATTGGACGATGTGGATTCCAGTAGGGATGAAGGGAGTAATGAGAATCAGATTGTGAAGGTTGATGGCGCAAAGAGGGCGTTAGTTGGAGCAGGGGCTCGGATCCTGTTTTACCCGACGCTTTTGTATAATGTACTTCGGAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTATTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTTCCATCATCATTGTATCATGCTCATGAGATTGATCATTTAGTGATTCCTACAAGGGATTATCTCTTTTCCCCTTCACTAGAGGATATTAGCCGTGCTGTGCAATTCATTCATCAAAATGCATGTTGTGGTAAAACTACTTATGTTCATTGTAAAGCTGGTCGAGGAAGGAGCACAACAATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCCGCAACTGCCCTGGATTATGTGCGGTCTCGCAGACCTAGGGTGCTGCTCGCACCATCGCAGTGGAAGGCTGTTCAAAACTACAGCAAGTGCCGACATTCTCCTTCTAGTGCCAGGCCTACTACTCCTACGCCATATTCTCCTTCTAGGGATGCAGTTCTTATAACCCAAGCTGATCTTGAGGGTTACCATAAGGCATGCGATGCTGGTATGCAGTTGGCCATCGTTACTAGAGTGCCAAAGGCCAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGTAGCAGTGTCCCAGCAATCAGACGGTTGCCAATTTTCGAGGCCCGTGCTTGCTAA 873 0.4548 MKIEQLDDVDSSRDEGSNENQIVKVDGAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFSPSLEDISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPATALDYVRSRRPRVLLAPSQWKAVQNYSKCRHSPSSARPTTPTPYSPSRDAVLITQADLEGYHKACDAGMQLAIVTRVPKAKPMIARLSCLFASLKVSGSSVPAIRRLPIFEARAC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1722 290 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 268 - -
Lele07g1722 290 Gene3D Protein tyrosine phosphatase superfamily 60 206 IPR029021 -
Lele07g1722 290 FunFam Dual specificity phosphatase domain protein 60 207 - -
Lele07g1722 290 Pfam Dual specificity phosphatase, catalytic domain 82 202 IPR000340 GO:0008138|GO:0016311
Lele07g1722 290 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Lele07g1722 290 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g1722 290 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Lele07g1722 290 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Lele07g1722 290 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Lele07g1722 290 CDD PTPMT1 60 203 IPR044596 GO:0004721
Lele07g1722 290 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1722 Lele-ChrLele07 10720328 10722434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1722 1 270 Protein tyrosine phosphatase (PTP) family AT2G35680 51.429 9.40e-102 299