Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1712 ATGGGAAGAGCTCCCTGTTGCAAAAAAGCTAACGTGAAAAGAGGACCATGGTCTCCTGAAGCAGCACGCCACTCTCAAGAGCTACCTCCACAAACATGGCACTTGTGGCAATTGGATCGCTCTCCCCAAAAAAGCCGGTGGTCTCTTATAGCTGCTCAGTTGCCTGGAAGAACGGACAATGATGTGAAAAACCACTGGAACACAAAGTTGAAGAAGTTTTTTGCAGGAAACAGTTCTAACACGAATTCGAATGAGGGCAATAGTTATGTGCCGTTCTTATCATTTTCCCCTCAAAAACCTCAAGGCGATGCCTTTTTGGTAGGACGCAAGGAGTCTGCAGATTATTTTGAGCCCTGTGTTCTGGAGCTGGGCAAAATAATACAGTTCCATTTTCAGGAACAAAACCTCTGGAATCTCAGGTTTCAGACGTTGGAAGCGGCGTGA 444 0.4617 MGRAPCCKKANVKRGPWSPEAARHSQELPPQTWHLWQLDRSPQKSRWSLIAAQLPGRTDNDVKNHWNTKLKKFFAGNSSNTNSNEGNSYVPFLSFSPQKPQGDAFLVGRKESADYFEPCVLELGKIIQFHFQEQNLWNLRFQTLEAA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1712 147 MobiDBLite consensus disorder prediction 1 28 - -
Lele07g1712 147 PANTHER OS09G0431300 PROTEIN 45 86 - -
Lele07g1712 147 SUPERFAMILY Homeodomain-like 3 76 IPR009057 -
Lele07g1712 147 SMART sant 13 72 IPR001005 -
Lele07g1712 147 Pfam Myb-like DNA-binding domain 45 68 IPR001005 -
Lele07g1712 147 Gene3D - 32 89 - -
Lele07g1712 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 74 IPR017930 -
Lele07g1712 147 ProSiteProfiles Myb-like domain profile. 9 70 IPR001005 -
Lele07g1712 147 CDD SANT 46 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1712 Lele-ChrLele07 10656862 10657631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1712 1 82 MYB Transcription Factor Family AT5G57620 39.200 1.24e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g1712 Myb_DNA-binding 8e-07 CL0123