Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1707 ATGAAGGAACCGGGTTGCGCCTTTTTACTCAACCCTAACCCTAACCCTAACCGTACCAATTGGTCGTGTGTTCCTCCCTTATCTGCAACTCAACCGCGGCGCTTCCCTGTGCTGCGAATTCAACAATCCATCATGGGCGAGTTTCAACTTTCAGTCTGTAAGGTGCACGGATCGTTGGCTCGTGCCGGCAAAGTTCGTGGCCAAACGCCAAAAGTAGCCAAACAAGACAAAAAGAAGAAGCCCAGGGGACGTGCCCACAAGCGAATGCAGTATAATAGACGTTTTGTCACTGCTGTTGTTGGCTTCGGGAAAAAGCGAGGGCCAAACTCTTCGGAGAAATAA 342 0.5029 MKEPGCAFLLNPNPNPNRTNWSCVPPLSATQPRRFPVLRIQQSIMGEFQLSVCKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1707 113 Pfam Ribosomal protein S30 54 110 IPR006846 GO:0003735|GO:0005840|GO:0006412
Lele07g1707 113 MobiDBLite consensus disorder prediction 73 88 - -
Lele07g1707 113 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 46 113 - -
Lele07g1707 113 MobiDBLite consensus disorder prediction 64 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1707 Lele-ChrLele07 10631289 10632804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1707 52 113 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 93.548 3.78e-28 95.9