Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1704 ATGGTGGAGAAGACGAAGGGCAGGAAGGAGGAGGTGGTTACCCGAGAGTACACCATCAACCTCCACAAGCGCTTGCATGGCTGCACATTTAAGAAGAAAGCTCCTAACGCAATAAAGGAGATAAGGAAGTTTGCCCAGAAAGCTATGGGTACAAATGATGTGAGAGTGGATGTGAAGCTGAACAAGCACGTCTGGAGCCAGGGAATCCGAAGTGTCCCAAGGAGGATTCGGGTACGTATTGCTCGCAAGAGGAACGATGATGAGGATGCAAAGGAAGAGCTTTATTCGCTGGTTACCGTAGTTGATACCACCCGAGATGAGCTCAAAGGGTTGGGCACCAAGGTTATTGAAGATGACGAGTGA 363 0.4931 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKLNKHVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVDTTRDELKGLGTKVIEDDE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1704 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele07g1704 120 FunFam 60S ribosomal protein L31 6 119 - -
Lele07g1704 120 Gene3D - 9 120 IPR023621 -
Lele07g1704 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Lele07g1704 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lele07g1704 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 118 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele07g1704 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele07g1704 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1704 Lele-ChrLele07 10620401 10621550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1704 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 79.832 5.05e-67 196