LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g1697	ATGAGTCGCCAATATAACAACAATCGGAGCTCAAGCGGCAGCATCAGTAAAATGAGCCCCCACACTCGCCTAGAAGACGCAGACGAAATCATTGTGGATGCTGCTGTGAGCTCCAACCACGACGACTCCATGTGCGAGCTCGATGGTTCCGTAGACAAAGCCGTTGAAGGCTCAGCTGGCGAGCCTTCCACGGTCTTTATCGGTTCAGATGATAAAACAAGTGCCGATTATTACTTCGATTCCTACTCTCACTTTGGTAATTCCTTATTCGAAAAATTTCCTTTACTATGTGTCTTACGTTCTGATAATGGAACTAGTAAAAGCTGGCGACCTAGCATTTGGTTTACTTTACCTATATTCTCTAATCCACTGTACATGCAGGAAATGTTGAAGGATACTGTGAGAACTAAGACGTACCAAAATGTGATTTATCAGAATAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTGGGTGCTGGGACTGGAATTTTATCTCTCTTCTGTGCCAAAGCTGGGGCAGAACATGTCTATGCGGTGGAATGCTCTGACATGGCTGACATGGCAAAGGAGATAGTTGAAACTAATGGATATTCTAATGTTATAACAGTTCTGAAGGGAAAGATTGAAGAAATTGATCTTCCTGTTGCTAAAGTTGACATAATAATTTCAGAATGGATGGGATACTTCTTGCTGTTTGAGAATATGCTTAATACTGTTCTCTATGCACGTGACAAGTGGCTAGTGGATGATGGAGTTGTGCTACCAGATAAAGCTTCTCTATATCTTACAGCAATTGAAGATGCAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTATATGGATTTGACATGAACTGCATTAAGAAGCAAGCAATTATGGAGCCTCTTGTTGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAACTACTCAAGACAATGGATATCTCTAAAATGGTACCTGGAGATGCGTCCTTCACTGCACCTTTTAAGCTTGTAGCTGAACGTGATGATTATATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACCAGGTGTCATAAATTGATGGGTTTCTCTACAGGACCAATATCCCATGCGACTCATTGGAAGCAAACAGTGCTTTACCTAGAAGACGTTTTGACCATATGTGTTGGGGAGGCCATTGCGGGAAGCATGACCGTGGCCCAAAATAAGCAAAATCCTCGAGATGTTGACATAATGCTCAAGTATTCATTAAATGGTCGACGATGCGTGGTTTCAAGAGTTCAGTATTACAAGATGCGCTGA	1305	0.4054	MSRQYNNNRSSSGSISKMSPHTRLEDADEIIVDAAVSSNHDDSMCELDGSVDKAVEGSAGEPSTVFIGSDDKTSADYYFDSYSHFGNSLFEKFPLLCVLRSDNGTSKSWRPSIWFTLPIFSNPLYMQEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVETNGYSNVITVLKGKIEEIDLPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMNCIKKQAIMEPLVDTVDKNQIVTNCQLLKTMDISKMVPGDASFTAPFKLVAERDDYIHALVAYFDVSFTRCHKLMGFSTGPISHATHWKQTVLYLEDVLTICVGEAIAGSMTVAQNKQNPRDVDIMLKYSLNGRRCVVSRVQYYKMR	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g1697	434	Gene3D	-	258	434	-	-
	Lele07g1697	434	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	150	225	-	-
	Lele07g1697	434	FunFam	probable protein arginine N-methyltransferase 1	107	256	-	-
	Lele07g1697	434	MobiDBLite	consensus disorder prediction	1	22	-	-
	Lele07g1697	434	CDD	AdoMet_MTases	155	255	-	-
	Lele07g1697	434	Gene3D	Vaccinia Virus protein VP39	66	256	IPR029063	-
	Lele07g1697	434	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	112	415	IPR025799	GO:0016274\|GO:0018216
	Lele07g1697	434	MobiDBLite	consensus disorder prediction	1	19	-	-
	Lele07g1697	434	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	119	433	IPR029063	-
	Lele07g1697	434	FunFam	Blast:Protein arginine N-methyltransferase 1	258	434	-	-
	Lele07g1697	434	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	44	421	IPR025799	GO:0016274\|GO:0018216

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g1697	Lele-ChrLele07	10587956	10591895	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g1697	127	397	C2H2 Transcription Factor Family	AT3G12270	37.884	2.48e-57	197