Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1691 ATGGACTTAACCACCGCCGCAATTAACCACATCGCCGCCTCCAATACCACCGGTACTAAATCCCCAGAACCTGACAGTGAAATTCCGACCCGGATCCAGCCCGCGCCCGCCAAGTCCTTGTCCAACGGCGTCCTGAAGCGCCATCATCCTCACCACAAGCATCCCGTGCCGGTCATCTACAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCCTCGACGGTTGTGGCGAATTCATGCCTTCTCCGAACGCCAATTCAGCCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAACTTCCATCGCCGTGAGCCCGAGGAGCCCATTTCCACTGCGACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCCCCGCCACCTCCGCCGTTCCCAGCTACGAATCGGAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCATCTTCCTACTACCCTTCCGCGCCCCACATGCTCCTGGCTCTCTCTGCCGGTTTATCGGCCCATCCGGAGAGCACGGCAGCTCCGGCGAATCTTTTGGGTACGCCGACTTTGACTTCTAGGAAGCGGTTCAGGACCAAGTTCACACAAGAGCAGAAGGATAAAATGTACCAGTTCGCCGAGAGAGTGGGGTGGAAGATGCAGAAGAGAGACGACGATTTGGTGCAAGAGTTCTGCCACGATATCGGGGTAGATAGAAGCGTTTTGAAGGTTTGGATGCACAATAATAAGAACACTTTGGGGAAGAAAGACGCCGTGAATGGGAATAGAAACGTTCTCGAGCTAGACCCAAACAACAATCACGACAATGAAACCACCGGCCACAACAACGACGACGACGAGCACAACAACAACAACAACTGCAGCACCCACCAGGATCCGAATCATCACTACCAGAACGATAGTGGGGCAAACGCCGGTACTAATGGGTCGTCTTCGTCTTCTTAA 969 0.5573 MDLTTAAINHIAASNTTGTKSPEPDSEIPTRIQPAPAKSLSNGVLKRHHPHHKHPVPVIYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIKCAACGCHRNFHRREPEEPISTATHVIEYQPHHRHHPPPPPPFPATNRSPNSASPPPISSSYYPSAPHMLLALSAGLSAHPESTAAPANLLGTPTLTSRKRFRTKFTQEQKDKMYQFAERVGWKMQKRDDDLVQEFCHDIGVDRSVLKVWMHNNKNTLGKKDAVNGNRNVLELDPNNNHDNETTGHNNDDDEHNNNNNCSTHQDPNHHYQNDSGANAGTNGSSSSS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1691 322 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 111 IPR006456 -
Lele07g1691 322 MobiDBLite consensus disorder prediction 279 293 - -
Lele07g1691 322 MobiDBLite consensus disorder prediction 126 156 - -
Lele07g1691 322 MobiDBLite consensus disorder prediction 294 322 - -
Lele07g1691 322 FunFam Zinc-finger homeodomain protein 2 186 256 - -
Lele07g1691 322 MobiDBLite consensus disorder prediction 256 322 - -
Lele07g1691 322 Pfam ZF-HD protein dimerisation region 58 112 IPR006456 -
Lele07g1691 322 Gene3D - 189 256 - -
Lele07g1691 322 MobiDBLite consensus disorder prediction 1 34 - -
Lele07g1691 322 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 195 252 IPR006455 -
Lele07g1691 322 SUPERFAMILY Homeodomain-like 191 256 IPR009057 -
Lele07g1691 322 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 60 111 IPR006456 -
Lele07g1691 322 MobiDBLite consensus disorder prediction 132 147 - -
Lele07g1691 322 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 254 - -
Lele07g1691 322 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1691 Lele-ChrLele07 10550951 10551919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1691 20 287 ZF-HD Transcription Factor Family AT3G28920 54.064 4.17e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele07g1691 ZF-HD_dimer 9.5e-29 No_clan