Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1688 ATGGGGAGACCGCCTTGCTGTGATAAGGAAGGGGTCAAGAAAGGACCTTGGACTCCCGAAGAAGATATCGTTTTGGTCTCTTATATCCAGGAACATGGTCCTGGCAACTGGAGAGCTGTGCCCACTAATACAGGGCTGGCACGGTGCAGTAAGAGTTGTAGACTTAGATGGACTAATTACCTAAAGCCAGGAATTAAACGTGGTAACTTCACAGACCAAGAGGAGAAGATGATAATCCATCTTCAAGCCCTTCTGGGCAACAGATGGGCAGCCATAGCCTCGTACCTTCCACAGAGAACCGACAATGACATAAAGAACTATTGGAATACCCATTTGAAGAAGAAGCTCAAGAAATTGCAAGCACCATCATCATCATTAGTTGGTCATGAGTCATCAATGCCGCGAGGCCAGTGGGAAAGAAGGCTTCAAACCGACATCCACATGGCCAAGAGAGCTCTTAGCGAGGCTCTATCTCCACATCACACACCTTCTTCCTTATCCTCCGAATCATCAAATCCCTCTTATAATAAGCCAGCAACATCCCAGTGCTTAACCTATGCCTCAAGTGCAGATAACATAGCTCGTTTGTTGAAAGGATGGATGAAAAATCCACCAAAGCCGCCGTCCACAACAATTACACGAGGTTCTACAAATAACCTAGCTGCTTCAGCTTCGGGTAACGATACTGCTTCTAGCGAAGGAATTACCACGACAAGTTCATCGAAGGGAAACGGCAGAACGGTTCAATTATCTTATACTAGTTTTGACTCCTTGTTGGGGTTTGAGTCTTTGGATCGCTCTTCGAATTCTGATTTTTCTCCAGAGGCTACTCTTGAAAGCAAGCCGGATTGTGAAGGGACCGAAATGCCCTTATATTTGCTTGAGAAGTGGCTTCTCGATGACACTGCTATATATGATCACATCATCGTTTGA 933 0.4555 MGRPPCCDKEGVKKGPWTPEEDIVLVSYIQEHGPGNWRAVPTNTGLARCSKSCRLRWTNYLKPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQAPSSSLVGHESSMPRGQWERRLQTDIHMAKRALSEALSPHHTPSSLSSESSNPSYNKPATSQCLTYASSADNIARLLKGWMKNPPKPPSTTITRGSTNNLAASASGNDTASSEGITTTSSSKGNGRTVQLSYTSFDSLLGFESLDRSSNSDFSPEATLESKPDCEGTEMPLYLLEKWLLDDTAIYDHIIV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1688 310 MobiDBLite consensus disorder prediction 199 246 - -
Lele07g1688 310 SMART sant 13 63 IPR001005 -
Lele07g1688 310 SMART sant 66 114 IPR001005 -
Lele07g1688 310 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele07g1688 310 Gene3D - 69 134 - -
Lele07g1688 310 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele07g1688 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
Lele07g1688 310 MobiDBLite consensus disorder prediction 206 246 - -
Lele07g1688 310 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele07g1688 310 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele07g1688 310 MobiDBLite consensus disorder prediction 155 179 - -
Lele07g1688 310 CDD SANT 69 111 IPR001005 -
Lele07g1688 310 FunFam MYB-related transcription factor 13 66 - -
Lele07g1688 310 FunFam Transcription factor MYB30 68 125 - -
Lele07g1688 310 Gene3D - 13 66 - -
Lele07g1688 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele07g1688 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele07g1688 310 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele07g1688 310 CDD SANT 16 61 IPR001005 -
Lele07g1688 310 MobiDBLite consensus disorder prediction 158 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1688 Lele-ChrLele07 10528113 10529240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1688 1 303 MYB Transcription Factor Family AT5G62470 47.875 2.11e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1688 Myb_DNA-binding 2.7e-14 CL0123