Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1682 ATGGCGGAAGCTGCAGAGCCCAAAGCAGTGGCGGAGGCAGAGAAGAAGGAGCAGAGTTTACCCTTTTACCAGCTCTTCTCTTTTGCAGATAAGTATGACTGGTTGCTAATGATCTCTGGCAGCTTGGGAGCTGTCGTTCATGGCTCCTCCATGCCGGTTTTCTTTCTTCTTTTCGGTGAAATGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAGATGACAGACGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTGGGCCTTGTCGTTTGCGTAGCATCGTATGCGGGTACGACATTTCTTTTTCATTTGTCCTCTTTAATTCACTCATTTCTCCTTATAGATTTTGCTTGTCAAATTGCTTGTTGGATGTATACCGGGGAGAGGCAAGTGAGCACGTTGAGGAAGAAGTATTTGGAGGCGGTGCTTAAACAGGACGTTGGGTTCTTCGACACAGACGCTAGAACAGGGGATATTGTTTTCAGTGTTTCCACTGATACTCTGCTTGTTCAAGATGCTATTAGCGAGAAGGTAGGAAACTTCATACACTATCTCTCTACTTTTCTGGCGGGTTTAGTGGTCGGTTTTGTGTCGGCGTGGAGACTGGCGCTTCTGAGTGTGGCGGTGATTCCCGGCATTGCTTTCGCCGGTGGCTTGTACGCTTATACCCTCACTGGCCTCACTTCAAAGAGTCGTCAATCCTATGCCAATGCTGGCATAATCGCCGAGCAGTCGTTTTCAAATTTAGGGGCTTTCAGTAAAGGTAAAGCTGCCGGATACAAGTTGATGGAGATTATCAATCATAGACCTTCCATAGTGGAAGATGCATCAGATGGAAAGTGCTTGCCTGAGGCAGGGACGTATTCGTCACTGATTAGATTCCAAGAAATGGTCGGAAACAGAGACTTGTCCAACCCATCAACTCGCCGGACTCGTTCATCTCGGCTGAGCCATTCGCTTTCCACCAAGTCTTTGAGCCTCCGGTCCGGGAGCTTGAGGAATCTGAGCTACCAGTACAGCGCCGGAGCAGATGGTCGGATTGAGATGGTATCAAGTGCAGAAACGGACAAGAAAAATCCGGCTCCTCAGGGTTATTTCTTCCGACTGCTCAAGTTAAATGCCCCAGAATGGCCTTACTCAATCATGGGAGCTGTAGGCTCTGTTCTCTCTGGGTTCATAGGCCCAACATTTGCGATCGTGATGAGCAACATGATCGAGGTATTTTACTACAAGAATTACGCATCCATGGAGAAAAAGACCAAGGAGTTTGTCTTCATATACATCGGAGCTGGTCTCTATGCGGTGGGCGCGTATTTGATCCAACATTACTTCTTCAGTATAATGGGAGAAAATCTCACCACAAGGGTTCGAAGAATGATGCTTGCCGCAATATTAAGGAATGAAGTTGGATGGTTCGATGAGGAGGAACACAATTCGAGCCTGGTTGCAGCGAAGCTAGCGACGGATGCTGCAGATGTGAAGTCGGCGATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACGTCTCTGTTAACTTCATTTATAGTAGCTTTTATCGTGGAATGGAGGGTTTCTTTGCTCATCCTTGCGACCTTCCCTTTACTTGTTCTGGCTAATTTTGCCCAGAGTTCAAAAGTTGTGCAGGCTGTATGGACCCACAATGCTAGAATGACGTTGATTGGTCAAGAATCTACTTTTTTACAATCTATCAATGTCTTTTTAATGCAGGCATTTCCCTTCTATTGA 1758 0.463 MAEAAEPKAVAEAEKKEQSLPFYQLFSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTDEVSKYALYFVYLGLVVCVASYAGTTFLFHLSSLIHSFLLIDFACQIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIIAEQSFSNLGAFSKGKAAGYKLMEIINHRPSIVEDASDGKCLPEAGTYSSLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSAGADGRIEMVSSAETDKKNPAPQGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYKNYASMEKKTKEFVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAAKLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQSSKVVQAVWTHNARMTLIGQESTFLQSINVFLMQAFPFY 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1682 585 SUPERFAMILY ABC transporter transmembrane region 24 252 IPR036640 GO:0005524|GO:0016020
Lele07g1682 585 CDD ABC_6TM_Pgp_ABCB1_D2_like 373 547 - -
Lele07g1682 585 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 251 - -
Lele07g1682 585 Gene3D ABC transporter type 1, transmembrane domain 38 298 IPR036640 GO:0005524|GO:0016020
Lele07g1682 585 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 384 553 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1682 585 MobiDBLite consensus disorder prediction 304 325 - -
Lele07g1682 585 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 252 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1682 585 Gene3D ABC transporter type 1, transmembrane domain 333 585 IPR036640 GO:0005524|GO:0016020
Lele07g1682 585 Pfam ABC transporter transmembrane region 384 549 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1682 585 Pfam ABC transporter transmembrane region 42 111 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1682 585 Pfam ABC transporter transmembrane region 121 252 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1682 585 SUPERFAMILY ABC transporter transmembrane region 365 559 IPR036640 GO:0005524|GO:0016020
Lele07g1682 585 PANTHER ABC TRANSPORTER B FAMILY 355 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1682 Lele-ChrLele07 10485759 10490413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1682 385 541 Calmodulin-binding Proteins AT2G36910 30.247 2.00e-13 71.6