Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1679 ATGGCCTTCCCTCCTCACACCTTCCTCTTCCAGGCCCACGAAGATCACGATCACCTACCTTCCACCTCCATCAACGCCTACACCTCCTCCTTCACTCCCAAGCTCTTCGAAGGGGGTGCAGTGCCTTTGATGTTGAAGAGATCCATGTCGTTTTCAGGGATGGAGAACAAGCTTGAAGATGAAGAGCTTTCCGATGATGGATCTCAGATGATGGGGGATAAGAAGAAGAGACTGAACATGGAACAAGTGAAGGCACTGGAAAAGAGCTTCGAGTTAGGGAACAAGCTGGAACCCGAGCGCAAAATGCAGCTGGCCAAGGCTCTGGGCCTTCAGCCAAGGCAGATCGCTATTTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAGAAGGAATATGAAGCTCTCAAGAGGAAGTTTGAAGCTCTCAGGGCTGATAACGTTGCCCTTAAGGCTCATAACCACAAATTACACGCTGAGTTACAAGCTCTAAAGGGGAGAGATTGCTGTGAAGGCGGAACTATCAACCTTAAGAAAGAACCTGAGGTATGTTGGAGCAATGGGAGTACTGAGAATAGCTCGGGTATACACTTGGATCTCTCAAGATCACAATTTATAAACAGCACTGTAACTTCAGTACAGAATGGTAAAAGCCTTCTTAAGCCAACAAGCAGAACCCAGCTCCTCCAATGCTCATCAAGATCATCAGAACTTCAAGATGAAAGCTTCTCCAACATGTTTCGCGGCGGCGGAAGCGGCGTCGATGAGCACCAGAATTTCTGGCCCTGGCCAGAGCACGACCAGTTTCATTGA 819 0.4884 MAFPPHTFLFQAHEDHDHLPSTSINAYTSSFTPKLFEGGAVPLMLKRSMSFSGMENKLEDEELSDDGSQMMGDKKKRLNMEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKRKFEALRADNVALKAHNHKLHAELQALKGRDCCEGGTINLKKEPEVCWSNGSTENSSGIHLDLSRSQFINSTVTSVQNGKSLLKPTSRTQLLQCSSRSSELQDESFSNMFRGGGSGVDEHQNFWPWPEHDQFH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1679 272 ProSitePatterns 'Homeobox' domain signature. 104 127 IPR017970 GO:0000981|GO:0006355
Lele07g1679 272 Gene3D - 66 139 - -
Lele07g1679 272 SUPERFAMILY Homeodomain-like 70 131 IPR009057 -
Lele07g1679 272 SMART HOX_1 72 133 IPR001356 GO:0003677
Lele07g1679 272 CDD homeodomain 74 130 IPR001356 GO:0003677
Lele07g1679 272 FunFam Homeobox-leucine zipper protein ATHB-13 65 133 - -
Lele07g1679 272 ProSiteProfiles 'Homeobox' domain profile. 69 129 IPR001356 GO:0003677
Lele07g1679 272 PRINTS Lambda-repressor HTH signature 100 109 IPR000047 GO:0003677
Lele07g1679 272 PRINTS Lambda-repressor HTH signature 109 125 IPR000047 GO:0003677
Lele07g1679 272 Pfam Homeobox associated leucine zipper 129 168 IPR003106 GO:0006355|GO:0043565
Lele07g1679 272 Coils Coil 121 155 - -
Lele07g1679 272 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 265 IPR045224 GO:0003700
Lele07g1679 272 Pfam Homeodomain 74 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1679 Lele-ChrLele07 10461360 10462961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1679 1 267 Homeobox Transcription Factor Family AT3G01220 50.175 8.32e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele07g1679 Homeodomain 4.6e-16 CL0123