Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1663 ATGGCAGAAGGTGTAAATAAGGCCACCTTTTTCTTCTTCTTGGCCATTTTCGCCATTTCTTCTCCATGCCTACACGCCAACATCGCCGACTACGACGACTATTACATTAAACGATCAGAGGAAGCCCGTAGAGCCGCTCTTGAAGCCTACGAGGCCGACCCCTACAATGTCACCTCCGAACTCAATCTCCACGTTCACTTAGCGATGGAGGAGAGCAACAGGAGGGGACTGAAGAGGGCTCAATACAAGGGACCATGCATAGCCACTAACCCTATTGACAGGTGCTGGCGGTGCAGGGCTGATTGGGCCACAGATCGAATGAGGTTAGCTAAATGTGTCAAGGATTTTGGCCGGAAGACCACCGGAGGACTGGGCGGCCGGATATATGTGGTCACCGACCCCTCCGACAACGACTTGGTTAACCCGAAGCCCGGAACTCTGCGGTTCGGGGAGGTTCAGGACGAGCCATTGTGGATCATCTTCCAACGCGACATGACCATCATTCTGCAACAAGAACTCATGGTTAACTAG 531 0.5273 MAEGVNKATFFFFLAIFAISSPCLHANIADYDDYYIKRSEEARRAALEAYEADPYNVTSELNLHVHLAMEESNRRGLKRAQYKGPCIATNPIDRCWRCRADWATDRMRLAKCVKDFGRKTTGGLGGRIYVVTDPSDNDLVNPKPGTLRFGEVQDEPLWIIFQRDMTIILQQELMVN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1663 176 Pfam Pectate lyase, N terminus 27 77 IPR007524 GO:0030570
Lele07g1663 176 PRINTS Pollen allergen Amb family signature 136 161 IPR018082 -
Lele07g1663 176 PRINTS Pollen allergen Amb family signature 112 129 IPR018082 -
Lele07g1663 176 PRINTS Pollen allergen Amb family signature 172 176 IPR018082 -
Lele07g1663 176 Gene3D - 89 176 IPR012334 -
Lele07g1663 176 SUPERFAMILY Pectin lyase-like 90 176 IPR011050 -
Lele07g1663 176 PANTHER PECTATE LYASE 18-RELATED 42 176 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1663 Lele-ChrLele07 10375533 10376162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1663 10 175 Polysaccharide Lyase AT1G14420 47.753 1.74e-55 179