Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1645 ATGAGAAGGCCACCTTGCTGTGATAAATCCAATGTGAAAAGGGGCCTTTGGACTCCTGAGGAGGATGCTAAACTACTCGCTTATGTCTCCAATCATCTCACTGGCAATTGGACTCTGGTTCCTAAGAAAGCTGGGTTAAACAGATATGGAAGCAGGTGGTCATTGATTGCAAGGAGATTCCCTGGGAGAACAGACAATGATGTGAAGAACCACTGGAACATAAAACTGAGGAAGAAGCTTATGAAGATGGGAATTGACCCAGTGACCCATAAGCCTGTGTCTCAAGTCCTTTCTGATTTGGGAACTATTAGTAATTCCCTCTCAACTGTAACAACTGAAAAACAATCTCCAAACACCAACTTAATGGTCTCTAATAATCAACTAGATCAAGAGGTGCAATCCCAATTCATTATTAACCCAGCTGAGAATAACGTCCAGTCACCCCATAATAATAATGAAGCTGCTGCGTCTTCATGTTCATCGTCGTCGTCATCTTCTTCCTCCAATAGCCCACAACTTATATGCTCTCCTCCTCCTCAGGCCATTACAACTACTGCTGCTACTGCTGCAGTTGTTCCTGCTCCTCTTTGTTCATCGTTTGATTGGAGCGAGTTTCTTCTGAGTGACCCGCTCGTGTGCACCGAGTTTCAACAGCTGAACAAGTACGGCGGCATGCATGGGGGTTTGTCGTCGTTGAGTCCCTCAGTTATGATGCAGAACCAAATTCAAGTCTCGAATAATGCAAGTGATGAGGATTCGGGGCTTGTGGCTTATGAGGAAAGCATGAAGAAGCGCCAAGTTTGTGATAAGCAATATTGTGAAGGCGCTTCATCATCTTCTTCGATGGACGACGACTCATTCATGGATTATATTTTGAACAGGGATAGTGAGATTAGGGCAGCTTTTCCTCAACTCCTAGACGGATCCACCGATTACTAG 939 0.4473 MRRPPCCDKSNVKRGLWTPEEDAKLLAYVSNHLTGNWTLVPKKAGLNRYGSRWSLIARRFPGRTDNDVKNHWNIKLRKKLMKMGIDPVTHKPVSQVLSDLGTISNSLSTVTTEKQSPNTNLMVSNNQLDQEVQSQFIINPAENNVQSPHNNNEAAASSCSSSSSSSSSNSPQLICSPPPQAITTTAATAAVVPAPLCSSFDWSEFLLSDPLVCTEFQQLNKYGGMHGGLSSLSPSVMMQNQIQVSNNASDEDSGLVAYEESMKKRQVCDKQYCEGASSSSSMDDDSFMDYILNRDSEIRAAFPQLLDGSTDY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1645 312 SUPERFAMILY Homeodomain-like 11 72 IPR009057 -
Lele07g1645 312 CDD SANT 17 73 IPR001005 -
Lele07g1645 312 MobiDBLite consensus disorder prediction 142 176 - -
Lele07g1645 312 PANTHER F14D16.11-RELATED 1 50 - -
Lele07g1645 312 SMART sant 13 78 IPR001005 -
Lele07g1645 312 Gene3D - 46 91 - -
Lele07g1645 312 Pfam Myb-like DNA-binding domain 14 73 IPR001005 -
Lele07g1645 312 Gene3D - 7 45 - -
Lele07g1645 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 80 IPR017930 -
Lele07g1645 312 ProSiteProfiles Myb-like domain profile. 9 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1645 Lele-ChrLele07 10215734 10217224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1645 1 307 MYB Transcription Factor Family AT3G28470 35.493 1.42e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1645 Myb_DNA-binding 2.8e-13 CL0123