Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1643 ATGATGGGCAAAGCTTCACTGGATCTCAGGAATTGCCTTCTGCTGCTATTGTGCAGCTCCATGGGCTTATGGGGTTTTGCTGCATCGGAGGTTGAAGATGACGTGAAATGCCTCAAGGGCATCCAAGATTCGTTGGGGGGTCCTGATGGGAAGCTCTCAACGTGGCAATTCAACAACAACACACCCGGCTTCATTTGCCGATTCAACGGCGTTACGTGCTGGAATGAGCAGCAGAATCGCATCATCAATCTGATGCTCAATGGTATGGGGCTCTCCGGTCGCGTGCCGGAGTCCTTGAAGTACTGTGGTAATCTGCAGCGACTGGATCTTGGGTCCAACGACCTTTATGGTGAGATCCCCAATGAGCTTTGTGTTTGGATGAAGTATTTAGTGAGCCTTGACTTGTCGACAAATCGTCTTTCTGGACCTATTCCCCCTTCTCTCGGGAATTGCTCGTATTTGAATGAGTTAAGCCTTTCCGGTAACCAGCTTTCAGGGGTCATCCCTGTCGAAATTGGGAGCTTGACTAGGCTTGCAAAGTTTTCTGTTGCTAATAATCGTCTTGAGGGTGCGATTCCTTCGTCTTTAAGTCGGTTTGACAAGGAAAACTTCGAGGCGAATAGTGGGCTTTGTGGGGATCCTCTTGGATCTAAGTGTGGAGGGCTGAGTAAGAAGAATCTTGCCATCATCATAGCTGCTGGGGTGTTTGGTGCAGCTGCTTCTTTGTTACTGGCTTTTGGGCTTTGGTGGTGGTACCATTTGAGATTGAGTAAGAAGGGGTTAGGAGACAGAGCAAGTGATAATTGGGCTGTGAGATTGAGGGGTTACAAGCTTGTGCAAGTCACTCTATTCCAAAAACCCCTTGTGAAGGTTAAACTAGGCGATTTGATGGCGGCTACCAATAATTTCAGCGCAGAAAACATTCTTATTTCAACAAGAACAGGAACTACTTACAAAGCAGATCTTCCTGATGGGTCAACCCTTGCAGTCAAACGGCTCAATACATGTAAAATCTTGGAGAAGCTCTTTCGCGTTGAGATGAATAGGCTAGGCCAACTCAGGCACCCGAATTTGGCACCGCTTTTGGGATTCTGTGTAGTGGAAGAGGAAAAGTTTCTGGTTTACAAGTACATGTCAAATGGAACTCTCTTCTCCTTGTTACACAAAAACGGCGATGCATTGGACTGGCCCACGAGATTCAGAATAGGCTTGGGGGCAGCTAGGGGTCTTGCTTGGCTGCATCATGGGTGCCATCCCCCTATTATACACCAAAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTAATGGACTCTGGACTTGCCCGACTTATAACATCTGACTCTGAAGGGACTAGTTTTGTGAATGGAGACTTGGGGGAACTTGGCTATATAGCTCCAGAATATTCTAGCACTCTGGTTCCTTCACTAAAAGGAGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGGCAGAAACCTCTTGAAGTCAGCATTGGAGAGGAAGAAGTTAAGGGTAATTTAGTGAATTGGGTGAATACGCTTTCTAATTCGGGTCGCATCAAGGGTTGCACTGACAAGGCCATAAGTGGAAAGGGACACGATGAGGAGATTTTGCAGTTTCTGAGAATTGCATGTAACTGTGTGGTTTCTCATACTAAGGATAGGTTGTCCATGTACCAGGTTTATCATTCGTTGAAGAGTATATCTAAGGACCAAAGTTTTTCGGAGCATGATGATGAATTTCCACTTATATTCGGGAAGCCTAATGATGAATCAGCTTAG 1809 0.4577 MMGKASLDLRNCLLLLLCSSMGLWGFAASEVEDDVKCLKGIQDSLGGPDGKLSTWQFNNNTPGFICRFNGVTCWNEQQNRIINLMLNGMGLSGRVPESLKYCGNLQRLDLGSNDLYGEIPNELCVWMKYLVSLDLSTNRLSGPIPPSLGNCSYLNELSLSGNQLSGVIPVEIGSLTRLAKFSVANNRLEGAIPSSLSRFDKENFEANSGLCGDPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSKKGLGDRASDNWAVRLRGYKLVQVTLFQKPLVKVKLGDLMAATNNFSAENILISTRTGTTYKADLPDGSTLAVKRLNTCKILEKLFRVEMNRLGQLRHPNLAPLLGFCVVEEEKFLVYKYMSNGTLFSLLHKNGDALDWPTRFRIGLGAARGLAWLHHGCHPPIIHQNICSNVILVDEDFDARLMDSGLARLITSDSEGTSFVNGDLGELGYIAPEYSSTLVPSLKGDVYGFGVVLLELVTGQKPLEVSIGEEEVKGNLVNWVNTLSNSGRIKGCTDKAISGKGHDEEILQFLRIACNCVVSHTKDRLSMYQVYHSLKSISKDQSFSEHDDEFPLIFGKPNDESA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1643 602 FunFam Nuclear pore complex protein NUP107 31 194 - -
Lele07g1643 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 596 - -
Lele07g1643 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Lele07g1643 602 Pfam Protein tyrosine and serine/threonine kinase 324 506 IPR001245 GO:0004672|GO:0006468
Lele07g1643 602 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lele07g1643 602 ProSiteProfiles Protein kinase domain profile. 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1643 602 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Lele07g1643 602 Gene3D Phosphorylase Kinase; domain 1 263 377 - -
Lele07g1643 602 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Lele07g1643 602 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 53 579 - -
Lele07g1643 602 SUPERFAMILY L domain-like 31 202 - -
Lele07g1643 602 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1643 Lele-ChrLele07 10198917 10200725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1643 12 600 Receptor kinase-like Gene Family AT3G28450 62.833 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele07g1643 PK_Tyr_Ser-Thr 4.8e-28 CL0016