Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1638 ATGGATGGGGATCAGGAAACAAGTGTGGCTGCATCATCATCATCAGTGGCTCCGAAGAAGAAGAAGAATGGGTCCATTCGATCCATTTTCATGCACGCCGATCCATTAGATTGGTTCCTCATGATCCTCGGCCTCGTTGGGTCCATTGGCGACGGTTTCACCACCCCTCTTGTCCTCCTCATCAGTAGCCGCTTGATGAACAATATTGGCTCTGGTCCTACCCTCGATCCCAATGCTTTTACCCATTCCATTAACAAGGGGTATTGCTGGACAAGAACAGGGGAAAGACAAGCTGCGAGAATGAGAGCTAGGTATTTGAAAGCTGTGCTCAGACAGGATGTTGCTTACTTTGATCTGCACGTGACAAGCACCTCGGAGGTGATCGCCAGCGTCTCCAACGACAGCCTGGTAATTCAAGATGCTATTGCTGAGAAGGTTCCAAACTTCCTGATGAACGTGTTTATGTTCATCGGGAGTTACATAGCGGCTTTTGCAATGTTATGGAGGCTGGCTATTGTCGGGCTCCCATTCGTGGTGCTTTTGGTGATTCCTGGTTTGCTCTACGGAAGGACTCTAATGGGGTTGGCGAGGAAGATCAGAGAAGAGTATAATCATGCTGGTACAGTTGCAGAGCAGGCAATTTCTTCCATAAGAACTGTGTATTCCTTCGTCCGAGAAAGCAAAACCATAGCCGCTTTCTCTGATGCTTTACAAGGATCTGTTAAATTGGGTCTCAAACAGGGCTTAGCTAAGGGATTAGCCATCGGAAGCAACGGCATCGTCTTCGCCATCTGGTCTTTCATGTCCTATTACGGCAGCACCCTCGTCATGTACCACGGCGCTCAAGGCGGTACCGTCTTCGCTGTCGGAGCTGCCATTGCCGTCGGTGGACTATCTTTAGGGGCGGCTTTATCGAACATGAAGTACTTCTCGGATGCGAGCACAGCAGGGGAACGGATAATGGAGGTGATAAAAAGAGTTCCGAAGATTGATTCGGACAACATGAACGGAGAGATTCTGGAGCGCGTTTCAGGGGAAGTGGAATTCGATCGGGGCTACGATACTCAGTTAAAAGAATCCAACAATATAGCATCAATGCTGCTTGGTGCTTGCATACCCACCATACAAGAACCCAATGGTCTGATTGTTGACAGTGAAAAAGCAACAGAACAATTGAAAACCCAACAAGAAGATGTTGTCTCTGCCCCGTCGTCTATATCAAACAGAGACATGAACAACACTAGTAGCCGTAGGCTTTCCCTGGTGAGTCGTTCTAGCTCTGCTAATTCAATGGCAAGGAATCCAGCTTCAGTTGCTGATGAAGACGATGGTCATCATCATGTTACAGAAGATCAGAATTTCCCTGTTCCTTCGTTTCGGAGATTGTTGGCTCTTAATCTCCCAGAATGGAAGCAGGCAATTATGGGATGTGCAAGTGCGGTTCTCTTTGGTGCGGTTCAGCCATTAGAGAGAATGCTCTCCAAGATTCTCACATTTGAAGTTGGATGGTTCGATCAGGACGAAAATTCCAGTGGTGCTATTTGCTCTCGACTTGCTAAAGATGCCAGCGTGGTGAGGTCTTTGGTGGGGGATAGAATGGCTCTACTGGTTTCACTAGCTAACTTCTTTGATACTAAGATGAAGAGAACAGATGACTCCAATGGTCAATCCCATGACCATGGAGGAGGCGGAGACGGCGGTGGTAATATAGGAGGAGAAGCAAGAGCTTCTTCGCAGAATTTGACAGACCCCTATCCCTTATTCTATGTGAAGTTAGTGAAACAAGCCTTTCAGAACCAAACAGAAAAATTTGATATGTTCCTGGCAATCATCAGAGATTTCAGGGCTCAAAGGATTGACATTGCTGGTCTCACAGAAAGTGTGAAGGAACTATTGAAAGGGCATAGCCATTTGATTTCCGGATTCAATGTCTTCTTGCCCAAAGGCTACAAGATAAAGCCTGATGAATATGGAGCTCCTCCAAAGAAAGTGGTTGCCCGTGAAGAAGCTCTGGATTTTTTAGGCAAGATAAATGTTTTGCTCTCCCAGAAACGACTTCAAAATGATGATCATGCATGCCAATCATTCAGGGACACTATGAAAATGTTCCACGCAGGGAGAAAGGAAGTAACTGAGGTCTATATGGAGCAACATTATCGACAAGATAAGCTTATTACTTCTCATGATTACAATCTCAGCATTCATTCATCTAAGCTGGATGATGGCAAAGCAATGATTAAAGAGCATAAGAAGCAGGTTGAGGAAAGTAGGGATAGGAGAGTTCCTGTTTGGAATGAGAGAGAACCTGATCTTTCTAACAACAGGCGCTTAAAATGTGTTCCCTTCAAAAAAAGGGCAGAAGCTCGTAGGCTGACTTCTGACTTTCCTTCTTATGATTACAAAGATACCTTAAAGGTTTCACTGCTCTTAATTTTCAACAATTGTGAGGTAGTCACTTTACTTGGAAAGTATCCTGATCTTATGGATGAATTCAATGATTTCGTGGACAAATGTGAAGATATTGGTGGTTAATCATTTAATGGGGATGGTCAATTATTCAGATCATCAAAGTTGGAAGACAAAGATAGAGCCCAGAAGCGTGAGGTTCATGTGTCTAAAGAGAGGGAAGAAAACGATGAGAAATACACATGGATATCAATTCTTGAACTTGACCGGAGAGATTGTGAACCTAGTAATCCCAGCTACCGGCGTCTTCCTGAAGATGTACTGAACTTATAG 2739 0.4487 MDGDQETSVAASSSSVAPKKKKNGSIRSIFMHADPLDWFLMILGLVGSIGDGFTTPLVLLISSRLMNNIGSGPTLDPNAFTHSINKGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVIASVSNDSLVIQDAIAEKVPNFLMNVFMFIGSYIAAFAMLWRLAIVGLPFVVLLVIPGLLYGRTLMGLARKIREEYNHAGTVAEQAISSIRTVYSFVRESKTIAAFSDALQGSVKLGLKQGLAKGLAIGSNGIVFAIWSFMSYYGSTLVMYHGAQGGTVFAVGAAIAVGGLSLGAALSNMKYFSDASTAGERIMEVIKRVPKIDSDNMNGEILERVSGEVEFDRGYDTQLKESNNIASMLLGACIPTIQEPNGLIVDSEKATEQLKTQQEDVVSAPSSISNRDMNNTSSRRLSLVSRSSSANSMARNPASVADEDDGHHHVTEDQNFPVPSFRRLLALNLPEWKQAIMGCASAVLFGAVQPLERMLSKILTFEVGWFDQDENSSGAICSRLAKDASVVRSLVGDRMALLVSLANFFDTKMKRTDDSNGQSHDHGGGGDGGGNIGGEARASSQNLTDPYPLFYVKLVKQAFQNQTEKFDMFLAIIRDFRAQRIDIAGLTESVKELLKGHSHLISGFNVFLPKGYKIKPDEYGAPPKKVVAREEALDFLGKINVLLSQKRLQNDDHACQSFRDTMKMFHAGRKEVTEVYMEQHYRQDKLITSHDYNLSIHSSKLDDGKAMIKEHKKQVEESRDRRVPVWNEREPDLSNNRRLKCVPFKKRAEARRLTSDFPSYDYKDTLKVSLLLIFNNCEVVTLLGKYPDLMDEFNDFVDKCEDIGGXSFNGDGQLFRSSKLEDKDRAQKREVHVSKEREENDEKYTWISILELDRRDCEPSNPSYRRLPEDVLNL 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1638 912 MobiDBLite consensus disorder prediction 550 578 - -
Lele07g1638 912 Gene3D Paired amphipathic helix 669 835 IPR036600 GO:0006355
Lele07g1638 912 ProSiteProfiles PAH domain profile. 575 649 IPR003822 GO:0006355
Lele07g1638 912 SUPERFAMILY PAH2 domain 582 650 IPR036600 GO:0006355
Lele07g1638 912 SUPERFAMILY ABC transporter transmembrane region 27 331 IPR036640 GO:0005524|GO:0016020
Lele07g1638 912 CDD ABC_6TM_Pgp_ABCB1_D1_like 41 320 - -
Lele07g1638 912 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 491 537 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1638 912 Coils Coil 739 759 - -
Lele07g1638 912 FunFam Paired amphipathic helix protein Sin3 586 647 - -
Lele07g1638 912 Pfam ABC transporter transmembrane region 86 289 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1638 912 Pfam ABC transporter transmembrane region 491 538 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1638 912 Gene3D ABC transporter type 1, transmembrane domain 441 543 IPR036640 GO:0005524|GO:0016020
Lele07g1638 912 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 88 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1638 912 Pfam Paired amphipathic helix repeat 602 646 IPR003822 GO:0006355
Lele07g1638 912 SUPERFAMILY ABC transporter transmembrane region 460 538 IPR036640 GO:0005524|GO:0016020
Lele07g1638 912 MobiDBLite consensus disorder prediction 396 451 - -
Lele07g1638 912 Gene3D Paired amphipathic helix 587 647 IPR036600 GO:0006355
Lele07g1638 912 Gene3D ABC transporter type 1, transmembrane domain 76 372 IPR036640 GO:0005524|GO:0016020
Lele07g1638 912 PANTHER ABC TRANSPORTER B FAMILY 5 350 - -
Lele07g1638 912 MobiDBLite consensus disorder prediction 396 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1638 Lele-ChrLele07 10139142 10150004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1638 490 537 Calmodulin-binding Proteins AT2G36910 54.167 5.08e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele07g1638 ABC_membrane 9.8e-40 CL0241