Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1625 ATGCTTCAAAAAGGTGTGATATTGGCATGTTGCATTTCAGTTAAGCGAATCGGCATCTTATGCCGCTGCTTTCTGGTTGGAACTCATGTCGATACTCCGAATCCTTTTGTGCTTGATTTTTTTTGTTACAATCCTTTTGTGCTCGATGAAAACCCGCGAATGAGAAACAAAAACAAAAGAGACGAAGGCCCTCCAAGAACGAGGTTAAGGCTTAAAAGGGCAAGGGACTACGTGGTGTTATGGAACCTTGAAGTGCGACAATGGTGTAGTTGACTGCTGCTAAAAGACACTCCTATAATTCTTCTCCGTCATTTTGAAGTTTTTCGAGACATGCAAGCTCTTAAGGGTCAAGGAAATGATCAAAGAGGAAATACATATGAAATTGCATCAATTATTAGGAAATTCACAGAGCCAACTCGTAAAGACGGTGGCATATACTCCCATGCGAAACCAAATGGTGAATTTTTGCCTCTCCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCAGTCTGGAGTTCTTCTGTACGGTCCCCCAGGAACTGGCAAAACATTATTGGCCAAAGCTGTTGCCACCGAATGTTCCTTAAATTTTCTTTGTGTAAAAGGGCCTGAACTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCTAGATCATCACGACCATGTGTTATCTTCTTCGATGAGCTTGGTTCTCCTGCTCCAGCTCGGGGCCCTTCCAGATCCAGGGATTCTGGGGGTGTTATGGAAAGAGTGGTTTCTCAGGATCTCTTTATCATAGGTGCAAGTAACAGGCCGGACTTGATAGACCCTGCACTTCTACGCCCAGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAACTCTGATGCATCTTACAGCGGGAGGTGCATGGTTTCAGGCTGCAAAACGCAAGATCCAGAGTCCTCCTGTAAAGATGATGAAGCAGACTCTGTTGTCGTTGAATACAGTGATTTTGTCCAGGTATTGGTGGAGCTGACGCCTTCTCTTTCCATGGCTGAGCTTAAAAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACATCAAAATAA 1101 0.4387 MLQKGVILACCISVKRIGILCRCFLVGTHVDTPNPFVLDFFCYNPFVLDENPRMRNKNKRDEGPPRTRLRLKRARDYVVLWNLEVRQWCSXLLLKDTPIILLRHFEVFRDMQALKGQGNDQRGNTYEIASIIRKFTEPTRKDGGIYSHAKPNGEFLPLLHKDLFSSGLRKQSGVLLYGPPGTGKTLLAKAVATECSLNFLCVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELGSPAPARGPSRSRDSGGVMERVVSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYSGRCMVSGCKTQDPESSCKDDEADSVVVEYSDFVQVLVELTPSLSMAELKKYEQLRDQFEGTSK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1625 366 FunFam ATPase family, AAA domain-containing 2B 152 296 - -
Lele07g1625 366 Pfam ATPase family associated with various cellular activities (AAA) 174 295 IPR003959 GO:0005524|GO:0016887
Lele07g1625 366 PANTHER AAA-FAMILY ATPASE 156 300 - -
Lele07g1625 366 ProSitePatterns AAA-protein family signature. 266 284 IPR003960 GO:0005524|GO:0016887
Lele07g1625 366 SMART AAA_5 170 299 IPR003593 -
Lele07g1625 366 CDD AAA 168 295 - -
Lele07g1625 366 Gene3D - 156 296 IPR027417 -
Lele07g1625 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1625 Lele-ChrLele07 10055166 10059128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1625 167 303 Calmodulin-binding Proteins AT3G56690 43.448 2.24e-30 120