Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1608 ATGACTTCTATGTTGAACTCCATTCTTGGATCCTCTGAAGACGGTTCTATAGATTCCATCACACTATTTGTTGTTCTCCTGCTTATTTGTGTTGTGAGTGGACATCTTCTGGAAAAGAGCCGCTGGATGACTGAGTCAGGCGTCGCATTATTCATTGGCCTTTTAAGTGGAACCATCATTCTACTAACATCTAAGGGGAAAAGTTCACACATTTTCGTATTTAATGAAGAACTTTTTTTCATATATCTTCTTCCACCTATCATATTCAATGCAGGGTTCCAGGTGAAAAAGAAGCAAGTCTTTAACAACTTCATCCCAATAACTTTGTATGGTGTTTTTGGGAGTGTGATGTCATTTATCATCATATCCGTAGGTGGAAATCAATTATTCAAAGGATTAGACATTGGGGTGCTAGATCAGGATGAGACGCCCCATCTGTACAGTTTAGTTTTTGGTGAAGGCGTAGTCAATGATGCAACATCAGTGGTTCTTTTCAATGCAATTCTAAGATTTGACCTGTCTCATATCACCTTGGCCAATATCGGGCAGTTTGTCATCAATTTTGCATATTTATTCCTGAGGAGCGCCCTTCTTGGAGTAGGGGTTGGTTTGATTAGTGCAATCATTATAAAGAAGTTGTATTTGGACAGGTCCTTCGCCGCTGTAATCAGCAGAAAATTGCTTTCTGGTTTAAGTGGGATCCTCACCGTGTTCCTTTGTGGGATTATCATGTCACACTACACGTGGCATGGTTTTTCTGATTGTTCTAAAGTTACAAGCAGGCATGCTTTTGGAACTTTCTCATTTCTCGCTGAGATTTTTATCTTCGTATATGTTGGCATGGATGCTTTGGACATTGAGAAATGGAAATGTGCCAGCCAGAGTCCTTCTACATTAGTTGGGGCCAGTGCAATCCTATTATGCTTGGTTCTGCTCGGAAGGGCAGCTTTTGTGTTTCCCCTGTCAGCTCTGGCCAATTTTTGTAGGAAGTCTGACGATGACAAGATTACACTTAAGCAGATGGTTGGAGGATTAGTGACTAAGCCTCTGATGAGGCTATTGTTGAATCACCCTAAGGATATTAAGGGTTTGGATCGGCCGTTACTCGCTAATGAGAGCGATTCGGAATCTAACGTAGACATTGGTAATCCTCTCGATTCCAATCATATTGTTCATCACTATTGGCAAATCTTCGATGATACATTTATGCGCCCTGTTTTTGGAGGGAGAGGATTTGCTCCAGTTGTTCCGAATTCCGAAACAGACCTGATTCTACGTTAG 1281 0.413 MTSMLNSILGSSEDGSIDSITLFVVLLLICVVSGHLLEKSRWMTESGVALFIGLLSGTIILLTSKGKSSHIFVFNEELFFIYLLPPIIFNAGFQVKKKQVFNNFIPITLYGVFGSVMSFIIISVGGNQLFKGLDIGVLDQDETPHLYSLVFGEGVVNDATSVVLFNAILRFDLSHITLANIGQFVINFAYLFLRSALLGVGVGLISAIIIKKLYLDRSFAAVISRKLLSGLSGILTVFLCGIIMSHYTWHGFSDCSKVTSRHAFGTFSFLAEIFIFVYVGMDALDIEKWKCASQSPSTLVGASAILLCLVLLGRAAFVFPLSALANFCRKSDDDKITLKQMVGGLVTKPLMRLLLNHPKDIKGLDRPLLANESDSESNVDIGNPLDSNHIVHHYWQIFDDTFMRPVFGGRGFAPVVPNSETDLILR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1608 426 Pfam Sodium/hydrogen exchanger family 23 326 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele07g1608 426 PANTHER SODIUM/HYDROGEN EXCHANGER 12 342 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele07g1608 426 Coils Coil 418 426 - -
Lele07g1608 426 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele07g1608 426 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele07g1608 426 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele07g1608 426 Gene3D - 112 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1608 Lele-ChrLele07 9950024 9954494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1608 1 422 Antiporters AT3G05030 48.496 8.54e-153 442