Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1572 ATGGACACTCAAGCAGACCCTCTTGAAACGCCAGCCAAAAGGCACAAGTGCTCAGCATGCTATAGGCAATATAAGAAAAAGGAACACCTCATTGAGCACATGAAAATCTCAAACCACTCAGTCCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTACTGGTCCATTGCCGAAAGGAAATTGTTCCAAGCACTTCTCTCAACATGGTTGTCAACTTTGCTTAAAATTATTTGATAGCCCCACAGCTCTTATCGAGCATAAAGCGATATGTTATCTATCTGCACCCACTCCTCTGGGAACAGAGGCATTGACCTATGTAAGATCCCCATTGCATCGCCCAGATTCTCCTGTTGAAAACCACACTGGAAGGCACCCTGGAGCAATTGCAATTGATTGCGAAATGGTTGGTGGTGGAAGTGATGGAACTTTAGATCTTTGTGCTAGAGTGTGCATGGTTGATGAAGATGAGAATTTAATTTTCCACACCTATGTGCAGCCTCAAATCCCAGTTACTAACTATAGATACGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGCCTTTAAATGAAGTTCAAGGCAAGGTATTGCAAATTCTGTACAACGGAGAATCAATTGGCAAACTTAGATTGGATGGAGGAAAGGCCAATCTTCTTGTGGGGCATGACCTTGAACATGATATGGACTGCCTGAAATTGAATTATCCTGATCATATGTTAAGGGACACTGCAAAGTATCATCCATTGATGAAAACAAACTTGGTCAGCCATTCGCTTAAGTACCTTACTCGTACAAATTTAGGTTATGACATCCAGACAGGCACACATGACCCTTCTGAGGACTGTGTTTCCGTGATGAGGCTGTACAAGAGAATTCGAGGCCAAATTCATACGGAGGAAAACGTCAGAACATTTTCTGCAAGTAACTTTTCCGGCATTTCTGATTATTGGAAATCCAAGGAAGTTGAGAACTCAACACCAGATGAACTCTTTGCCATGTCAAAGTCAGACTACAAGTGCTGGTGTTTGGATTCAATGAAGAAAAATGAGAGCCAAATGAGCTGTTGA 1107 0.4228 MDTQADPLETPAKRHKCSACYRQYKKKEHLIEHMKISNHSVHQPKCGVCQKHCKSFESLREHLTGPLPKGNCSKHFSQHGCQLCLKLFDSPTALIEHKAICYLSAPTPLGTEALTYVRSPLHRPDSPVENHTGRHPGAIAIDCEMVGGGSDGTLDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMPLNEVQGKVLQILYNGESIGKLRLDGGKANLLVGHDLEHDMDCLKLNYPDHMLRDTAKYHPLMKTNLVSHSLKYLTRTNLGYDIQTGTHDPSEDCVSVMRLYKRIRGQIHTEENVRTFSASNFSGISDYWKSKEVENSTPDELFAMSKSDYKCWCLDSMKKNESQMSC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1572 368 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 355 - -
Lele07g1572 368 Pfam Exonuclease 139 302 IPR013520 -
Lele07g1572 368 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Lele07g1572 368 Gene3D - 135 323 IPR036397 GO:0003676
Lele07g1572 368 SUPERFAMILY Ribonuclease H-like 139 307 IPR012337 -
Lele07g1572 368 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Lele07g1572 368 Gene3D Classic Zinc Finger 2 65 - -
Lele07g1572 368 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Lele07g1572 368 SMART exoiiiendus 137 311 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1572 Lele-ChrLele07 9716630 9719877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1572 1 359 C2H2 Transcription Factor Family AT3G27970 51.667 5.69e-135 387