Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1564 ATGGCAATGTGCAGACTAACACAATCCCTAATAAATATTTCTCCTGTTAGTCCAAAAATAAACGTTACCCCTCTTCAGCGGCAGAAGGAGAAGGTTGTGTTGGTGATGGGGGCCACCGGCGCTGGGAAGTCCAGGCTCTCCATCGACCTCGCCACCCGTTTTCCTGCGGAGATCATCAACTCTGATAAAATACAAGTGTATGAAGGACTCGACACAGTGACAAACAAGATCACCGAGGAAGAACAACGTGGTGTTCCTCACCATTTACTAGGAACGGAGAATCCAAACTCAGAATTCACGGCAAGCAATTTCTGTGACATGGCTTCTCTTGCCATTGAGACAATTAGGGGTCGTGGAAAGCTTCCGATCATCGTCGGAGGCTCTAATTCGTTCCTGGAGGCTTTAATCGACGACGACGACTACAAATTCCGATCAAGGTACGATTTCTGTTGCCTGTGGGTAGACGTGGGCATGCCCGTTCTCAATTCGTACGTGGCAGAACGGGTGGATCAGATGGTCAAGAAAGGAATGGTGAACGAATTGAGGCCTTTTTTCAATCCAGAAGGGGACTATTCACGAGGGATCAGGAAGGCGATAGGAGTTCCGGAATTCGATAAATATTTTCGAAGGGAAGCACAGGCGGATGAGGATACGAGGCAGAGGCTGTTGGAGGAAGCGTTGAGGGAGGTGAAGGAGAACACTAGGGAATTGGCGGGAAAACAGCTGGGGAAGATCCAGAGCCTGAGGAACGCGAAGAGATGGAAGATGCAGCGCGTGGACGCGACATCGGTGTTTCGGAAGCGCGGGGATGAAGAAGAGGCGAATGAGGAGTGGAGGAAGGTGGTAGCGGAGCCAAGTGCGATGATCGTCGCCCAGTTCCTTCGCAGCTTCACAACAACGAAGAGTGGTGTGACTGGGGGACTAAGATTGGCGCCGCTGGAGAGCGCCATTGCTTCGTCATCTTCGCATCTTCGATCTCTGGAGGCACACTCGTGCCCTGTCTAA 1005 0.5144 MAMCRLTQSLINISPVSPKINVTPLQRQKEKVVLVMGATGAGKSRLSIDLATRFPAEIINSDKIQVYEGLDTVTNKITEEEQRGVPHHLLGTENPNSEFTASNFCDMASLAIETIRGRGKLPIIVGGSNSFLEALIDDDDYKFRSRYDFCCLWVDVGMPVLNSYVAERVDQMVKKGMVNELRPFFNPEGDYSRGIRKAIGVPEFDKYFRREAQADEDTRQRLLEEALREVKENTRELAGKQLGKIQSLRNAKRWKMQRVDATSVFRKRGDEEEANEEWRKVVAEPSAMIVAQFLRSFTTTKSGVTGGLRLAPLESAIASSSSHLRSLEAHSCPV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1564 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 140 IPR027417 -
Lele07g1564 334 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 294 IPR039657 -
Lele07g1564 334 Gene3D - 29 294 IPR027417 -
Lele07g1564 334 FunFam Adenylate isopentenyltransferase 5, chloroplastic 158 256 - -
Lele07g1564 334 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 158 256 - -
Lele07g1564 334 Pfam IPP transferase 143 242 - -
Lele07g1564 334 Pfam IPP transferase 65 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1564 Lele-ChrLele07 9637722 9638726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1564 145 307 C2H2 Transcription Factor Family AT2G27760 29.474 4.21e-19 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1564 07 9637722 9638726 Lele13g2004 13 27377195 27380781 CCT
Lele07g1564 07 9637722 9638726 Lele14g1939 14 25713330 25714109 CCT
Lele07g1564 07 9637722 9638726 Lele15g0401 15 2301949 2302728 CCT
Lele07g1564 07 9637722 9638726 Lele16g0423 16 2282576 2283877 CCT
Lele07g1564 07 9637722 9638726 Lele07g1564 07 9637722 9638726 ECH
Lele05g1503 05 9628194 9629195 Lele07g1564 07 9637722 9638726 hybridization
Lele06g1357 06 8706542 8707600 Lele07g1564 07 9637722 9638726 hybridization