Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1563 ATGGAAGGACAAAGTAACCAAGAGAAACCTCCGAAGATGACGGTGTTTAATTCTGGAGGAAGTGGTAACCGTGTGTGTCATTCAGCTGAGGATTTCGCGAAAAATGGGAATAGGGGCCAGGGAACTTGCCTCCCCGAACCATTTCAGAATTATGTTGAGTATCTTACAGAAGCCACGCCATATCTGCCAAATACTACTGCCGAATATGCACTTGGGAGCTGTTATCCTCCTGATGGCAGCTTGCCCAATGCTAATGGGCTCAATAGAACAGAGACGAACTTGTTTTACAATGATCCAGGAAAAGCATGCTGTTTTAAAGCTACTGATTCTTCTGCTGGGATAGACTTCAGGAAGGTGGGGTTTTGGAGACCAAATAGTGAAGGCCACCAATCGAAGAAATTTGCAACTAACCAACTCAGTCATCATGCTGAGGCTCCGTGGAAGGCAGAATCAGCTGGAGATAAACATTCTGCCTCAAAATTTGATCCAAGGGTAACAGTGGCTGAACCTGGTTTCCTTCCCAAATCACGAAGCAGTTCATCAAAACAGAAAGCCACTGCAGCTGACCGTCAACGCAGGCAACGTATTGCTGATAACCTTAAAGCTTTGCACGGCTTGCTACCAGCTCCAGCAGAGGCTTGCTCGGCATATATACTGGATGATGTCATTGACTATGTCAAATATTTGCAGCTTCAGATAAAGGAATTAAGTGGAAGAAGATTGCAAGAATCAACTGCTATGCCGCTCACATTCCGTGAGGGATATGGCCACTATATTAACCAGCAGATGCTGAATGAACCTCTTGAGGAGATGATGGGAAAACTAGTTGAGGAAAATCCAGAAGCAGCAGCTCAGCTGTTAGAGAATAAGGGCCTTTTTCTGTTGCCTTTGTCTTTGGCTGAAGACTTGCGCCAGGCTATGCACATGTTTGGTGGGATTCCGCGAGTCTAA 951 0.4564 MEGQSNQEKPPKMTVFNSGGSGNRVCHSAEDFAKNGNRGQGTCLPEPFQNYVEYLTEATPYLPNTTAEYALGSCYPPDGSLPNANGLNRTETNLFYNDPGKACCFKATDSSAGIDFRKVGFWRPNSEGHQSKKFATNQLSHHAEAPWKAESAGDKHSASKFDPRVTVAEPGFLPKSRSSSSKQKATAADRQRRQRIADNLKALHGLLPAPAEACSAYILDDVIDYVKYLQLQIKELSGRRLQESTAMPLTFREGYGHYINQQMLNEPLEEMMGKLVEENPEAAAQLLENKGLFLLPLSLAEDLRQAMHMFGGIPRV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1563 316 MobiDBLite consensus disorder prediction 138 192 - -
Lele07g1563 316 Pfam Helix-loop-helix DNA-binding domain 182 230 IPR011598 GO:0046983
Lele07g1563 316 MobiDBLite consensus disorder prediction 147 162 - -
Lele07g1563 316 MobiDBLite consensus disorder prediction 1 22 - -
Lele07g1563 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 242 IPR036638 GO:0046983
Lele07g1563 316 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 110 299 - -
Lele07g1563 316 CDD bHLH_AtbHLH_like 188 237 IPR045239 -
Lele07g1563 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Lele07g1563 316 Gene3D - 177 247 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1563 Lele-ChrLele07 9629780 9632388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1563 166 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 36.646 5.93e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele07g1563 HLH 2.4e-05 No_clan