Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1539 ATGTCGTTCTACATGACCTACCTTGCAAGATGGCCGGACTATTTCCATGTTGCCGAAGTTATGGGGAAAGTGGAGGGGCAAGGAGAGTCCTGGCATGGTCATGTTACTGCAGTAACTGTTGCCCCAGAATATCGTCGGCAGCAGTTAGCCAAGAAACTGATGAATCTGCTGGAAGACATAAGTGACAAGATTGACAAGGCTTACTTTGTGGATCTCTTTGTGAGAGCATCAAATGCACCTGCTATAAAGATGTATGAAAAGCTTGGCTATGTGATATATCGGCGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCATTATCGCGTGATACTGAAAAGAAGTCTATCATCTCTCTTAAACGGGCAGTCACTCCTGATGAATTAGAGGATGACTAA 414 0.4444 MSFYMTYLARWPDYFHVAEVMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDTEKKSIISLKRAVTPDELEDD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1539 137 Pfam Acetyltransferase (GNAT) family 28 90 IPR000182 GO:0016747
Lele07g1539 137 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 134 - -
Lele07g1539 137 CDD NAT_SF 17 60 - -
Lele07g1539 137 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 116 IPR016181 -
Lele07g1539 137 Gene3D - 1 136 - -
Lele07g1539 137 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 114 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1539 Lele-ChrLele07 9459570 9461892 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele07g1539 Acetyltransf_1 1.5e-11 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1539 07 9459570 9461892 Lele07g1539 07 9459570 9461892 ECH
Lele05g1479 05 9469046 9472012 Lele07g1539 07 9459570 9461892 hybridization
Lele06g1335 06 8539838 8544578 Lele07g1539 07 9459570 9461892 hybridization