Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1533 ATGAGAGGGGCGCTCAGAAATCGTAAGCGATTTGGGAAGCAGCAGATAGACAAGGACCATCTGGCGGAGCCTGTTGTACAACAAGAAAGGGTCTTTGATTGGGATTCGAATAGCAATGAAAATATCATGTTAGCCGAAAATGGGAGCAAGAGGAGTAGTTTAAGCTGTGATGAAAACGTTGAAGGAGTTGACATTGGGATGGAGGTGAAGAAACAAGATGATTTGAACGATCAGGTGCAGGTTGGTGGTCGACTATTGTCCACAGTGTCCGAGGGAGCTGACAACAATATATCTGATGATCGAGAGGCATTAAACTTGAAAGTTGAGAATAAGGATACAGAGCCAATTGTGCAACAAGAACGTGACTTAGATTGGGATATGAGTAAGGGTGGAAATGTGGGGTTTGTTGATGACAGGAGCAAAATGAGTAGTTTAACCTGTGATGATAACATTGGAGGGGTTGAAATTGAGGTGGAGGTGATGGAGAAAGATTATTTAAATGATAAATTGCAGATTGGTGGTCAAGTATTGCGCTCAGCGTCAACGAGAGCAGTCAGTAATGTATCTGATGGAGAGACAACTAAGAATGAGGAAGTGAAGCCAATCAACCATCAACCGTGTGACTTAGATTGGAATGTGAGCAAGAGTGGAAATGGATTGGCTAAGACTAGGATCAAAAGGAATACTTTATGGTATGATCGTTGCTTTGAAGGACTTGATATTGAGATGGAGTTGAAGAATAAAAGTGATGCAAATGATAAAGTGAAGACTAGCGGTCGAGTATTGCGCTCAATGTCAAAGAGAGTAGACAGTATGATATTTCAAGGTGGAGAAGCTGATGAGCTGTTGGTTAGGAAAAATGGAGAGAGTGAACATGTTTGGTTTGAGGAAAATAAGGTTAAGGTGGAAAAGGAAGAAGGGGATGATTTTGTTAGTAGCGGTTATGAGAAGGAGGGAGTTGATGTGAAAATGGATGGCAATGAAAGAAGGGAGTTGAAACGGAAGCGTGGCAGGCCCCCTAAATTGAAGATTGAGGAGCAAGATCAGGCAGTTGGTAATAGGCAACAGAAATGTGGCAGTCCTCCCAAATTGAAGATGGAAGAGCAAGATCAAATTGTTGGTAAAATGCAACGGAAGCGTGGGAGGCCACCCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATTGAACGTAAGCGTGGAAGGCCGTTCAAAGTGAAGATGGAAGTGCGAGATCAACTAGTTGGTAATATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATGCAACGTCAGCGTGGAAGGCCCCCCAAAATGAAGATGGAAGAGCAAGATCAACTTCCTGGCAAAAAAATGCCATGGAAGCGTGGAAAGCCTCCCAAAAGTGGGCAGAAAATTAATCATCTGGAAATAGCACGAAACAGAAAAGAAAAGGTGGGCTTTCAAAAAGGTAAGAAAAGTAGAACTGTGAGAGACAATACAAATGCAGTGGATGATATGTGCTTGAAAAAGGGATCTTGTGTAACAGAATCAAAAAAGAAGAGATTTTCTCCTGTCAAGAAGAATGAATTTGGGAGCCTTACAGAAACCAAGAATAGTGCATTGACTTCACCATCAATATCAAATTCAGCGAATCCTCTCATTAAGAAGAAAAAAGGAATGAGAACAGCAAAGCAGTTGGCGAGGCAACACATTTGGGAGCTGCTTTCGGCTGCAGGCTGGATAGTTGATTACAGACCTAGGAATCGCAAAGAGTATAATGATGCAGTGTATGTTAGTCCAGATGGAAAGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAGAAGCATTCTGAAGCTGGTGATGGTGAAGGTGAGGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGGAATTCAATATTCTAACTAAGGTCATTAAAAACAGAAGGAAAGGTAAAGGTAAATTGAAGCAAACAGGAGGAAAAGATGGAGATGCAATTAATGGAATCAAAAGAAAGGTGAAGAAAGAACAATTAGGTTCTTTTGGAGGCTTAAATATGTCATTGAAGGGGAAAGTGAAGAGAAAAATGTCACTTGTTGAGGAGGACAATTTAGACAATACACCACATCAAAGGTTTTCAGTTCTGGTCAAGGATCGTAAACGGCAGAAAACACACAATAAGAAGCGAAGTGTTTTTATGGTTCGCAATGCTGAGGAGATAGACTCAGAAACTAATGGGTATGTACTTTACACTGGAAAGCGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAGTCATGCAAAATGAGAGGGTTCACTATGTAAACCATGGAAGGAAAGGCGCGAAACTGGAGGGTAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAATTGTAACAATGTCAGAATTTGAAGCCCATGCAGGAAGCAGACTCTCTGATCCACTCAAAAATATACATATAGAGAGAGGAATTTCCCTTCTGCAATGCCTGCTAGACTCATGGAATAAACAAGATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACTACAAGGGAAGACCCCAATGATGAAGCATGCGGTGTCTGTGGTGATGGCGGAGAGTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGTTGCCTAAATATCAAAGAGTTCCCACCTGGCAACTGGCGATGCATTTATTGTTGTTGCAAATTTTGTGAGTTGGTTGACGGAAGTACAAATGAAAAAGATGGCTATGATGACTTTACTACATCTCCTTTACTTACGTGCCGATTATGCAATCAAAAATATCATAGATCTTGTGTGGAGGTAAATGGTGTCCAAGCTGATGACTCTAGCTTTGCATTCTATTGTGGAAATAGATGTGAGGAGTTATCCAAGAGACTTGAAATGCTTCTCGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTTAGATGTTGGCTATGATGCTTCTCAGATAGAATCTCAGATGGTTGAATGCAATTCCAAGCTAGCTGTCGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGATTAATCTCATCCACAGTATTCTTTATAACTGTGGTTCAAACTTCAATCGCCTGAACTATACAGGTTTTATTACTGCTATCCTGGAGAGAGGTGATGAGGTCATCGGCGCAGCATCTATTAGGATTCGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGATCCGCTATTTGTATAGGCACCAAGGAATGTGCCGCCGGCTTCTGAGTGCCATTGAATTGGCACTTGGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCAGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGGCCAGGAAGCAGATGATAAAGAATTTCAGTCTGCTGGTATTCCCTCATGCAGATATGTTAATGAAAGAGATAAAGAAGCCTAAAGTTGCTGATGAAGATCCAGTTCCTATAGAAGTTTCGAATCTTAAGCTTCAGAAGAATCAAAGTACACTCGAGGAAGCAACTGACTGTGATGAACCAAGTTCATTTAGGTCTGATTTGATCATTTCTGATGGGAGTGAGATACCTGCGTTGGATACATGCCCAGTGAATGATAGACACGTGTCTGTTGAATCTGTTTCCCCTGATGGCTTATTGAATAACACACATCACATTACTAGTGAGACTGTAGATCCTGATACAAGTCCAAAAGATGTAAAATATGAAGTTGGACTCCATGCTGTCAGCGATAATTTGACAGGGGAAGCCATGACTGATGTAAAGGCACATGGTTATGTTAGCGCTGCTCATTTACAAGCTGAAGAGATAATCAATCATGATTGTGTTCAATCGGAAGAAATAGATTCTGAATCTATCAATGGCTGCGGTTCTCAGCGGAAACACAGTGGTTATTGTGCCCAAGATGAAGTGAATCTCGAGACCACTGAAGCTGATAAATCAGACATGCGTGTTGCAGAAGCAATCAATCTCCATGGTCTCGTACATCCGGGAGATTCCCAATCAGTACAGATTGCTTCAGGTTCCTGCGAGGATATCACAGACGTTATAAATGAGAGAAATGAAGCAGCCATTACAGCTGATGGGAACTCAGAAGTTAGCGATAAGCCTGGTATAAATTGGTCTTCAGAGCCACTCGAGCCTGATTTACAGGTCAATCAAACTGGACAGGGCGACGCACCAACGTTGTGTGGTTCCGGCATGGCTTTTCACTGTGCATCAGGCGGTGGTACTTCATGTGGTAATACCGAAGTTATAGTTCTATCCAACGAAGCCAGTTGA 4395 0.4184 MRGALRNRKRFGKQQIDKDHLAEPVVQQERVFDWDSNSNENIMLAENGSKRSSLSCDENVEGVDIGMEVKKQDDLNDQVQVGGRLLSTVSEGADNNISDDREALNLKVENKDTEPIVQQERDLDWDMSKGGNVGFVDDRSKMSSLTCDDNIGGVEIEVEVMEKDYLNDKLQIGGQVLRSASTRAVSNVSDGETTKNEEVKPINHQPCDLDWNVSKSGNGLAKTRIKRNTLWYDRCFEGLDIEMELKNKSDANDKVKTSGRVLRSMSKRVDSMIFQGGEADELLVRKNGESEHVWFEENKVKVEKEEGDDFVSSGYEKEGVDVKMDGNERRELKRKRGRPPKLKIEEQDQAVGNRQQKCGSPPKLKMEEQDQIVGKMQRKRGRPPKVKMEEQDQLVGNIERKRGRPFKVKMEVRDQLVGNMQRKRGRPFKVKMEEQDQLVGNMQRQRGRPPKMKMEEQDQLPGKKMPWKRGKPPKSGQKINHLEIARNRKEKVGFQKGKKSRTVRDNTNAVDDMCLKKGSCVTESKKKRFSPVKKNEFGSLTETKNSALTSPSISNSANPLIKKKKGMRTAKQLARQHIWELLSAAGWIVDYRPRNRKEYNDAVYVSPDGKTHWSITLAYKRLQKHSEAGDGEGEVYIPGFKFVPIPLEEFNILTKVIKNRRKGKGKLKQTGGKDGDAINGIKRKVKKEQLGSFGGLNMSLKGKVKRKMSLVEEDNLDNTPHQRFSVLVKDRKRQKTHNKKRSVFMVRNAEEIDSETNGYVLYTGKRTVLAWMIDLGTVMQNERVHYVNHGRKGAKLEGRITRDGIHCDCCNEIVTMSEFEAHAGSRLSDPLKNIHIERGISLLQCLLDSWNKQDEHERKGFHFIDTTREDPNDEACGVCGDGGELICCDNCPSTFHQSCLNIKEFPPGNWRCIYCCCKFCELVDGSTNEKDGYDDFTTSPLLTCRLCNQKYHRSCVEVNGVQADDSSFAFYCGNRCEELSKRLEMLLGVKHDIEDGLSWTFIRRLDVGYDASQIESQMVECNSKLAVALSVMDECFMPYIDHRSGINLIHSILYNCGSNFNRLNYTGFITAILERGDEVIGAASIRIRGNQLAEMPFIGIRYLYRHQGMCRRLLSAIELALGSLNVELLVIPAVSEVRDTWTSVFGFEPLEVARKQMIKNFSLLVFPHADMLMKEIKKPKVADEDPVPIEVSNLKLQKNQSTLEEATDCDEPSSFRSDLIISDGSEIPALDTCPVNDRHVSVESVSPDGLLNNTHHITSETVDPDTSPKDVKYEVGLHAVSDNLTGEAMTDVKAHGYVSAAHLQAEEIINHDCVQSEEIDSESINGCGSQRKHSGYCAQDEVNLETTEADKSDMRVAEAINLHGLVHPGDSQSVQIASGSCEDITDVINERNEAAITADGNSEVSDKPGINWSSEPLEPDLQVNQTGQGDAPTLCGSGMAFHCASGGGTSCGNTEVIVLSNEAS 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1533 1464 SUPERFAMILY FYVE/PHD zinc finger 869 921 IPR011011 -
Lele07g1533 1464 MobiDBLite consensus disorder prediction 443 477 - -
Lele07g1533 1464 SMART PHD_3 917 977 IPR001965 -
Lele07g1533 1464 SMART PHD_3 875 916 IPR001965 -
Lele07g1533 1464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 864 931 IPR013083 -
Lele07g1533 1464 ProSiteProfiles Zinc finger PHD-type profile. 873 918 IPR019787 -
Lele07g1533 1464 CDD NAT_SF 1072 1131 - -
Lele07g1533 1464 Pfam Tify domain binding domain 798 847 IPR032308 -
Lele07g1533 1464 MobiDBLite consensus disorder prediction 1 22 - -
Lele07g1533 1464 SMART AT_hook_2 421 433 IPR017956 GO:0003677
Lele07g1533 1464 SMART AT_hook_2 399 411 IPR017956 GO:0003677
Lele07g1533 1464 SMART AT_hook_2 377 389 IPR017956 GO:0003677
Lele07g1533 1464 SMART AT_hook_2 333 345 IPR017956 GO:0003677
Lele07g1533 1464 SMART AT_hook_2 443 455 IPR017956 GO:0003677
Lele07g1533 1464 MobiDBLite consensus disorder prediction 448 465 - -
Lele07g1533 1464 MobiDBLite consensus disorder prediction 346 369 - -
Lele07g1533 1464 PANTHER PHD FINGER PROTEIN 12 558 1332 IPR042163 GO:0003714|GO:0045892
Lele07g1533 1464 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1016 1176 IPR000182 GO:0016747
Lele07g1533 1464 CDD PHD1_AIRE 876 915 - -
Lele07g1533 1464 PRINTS AT-hook-like domain signature 375 386 IPR017956 GO:0003677
Lele07g1533 1464 PRINTS AT-hook-like domain signature 441 451 IPR017956 GO:0003677
Lele07g1533 1464 PRINTS AT-hook-like domain signature 333 343 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1533 Lele-ChrLele07 9428130 9436394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1533 303 1183 PHD Transcription Factor Family AT5G36670 36.364 1.31e-179 566
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1999 13 27345881 27347497 Lele07g1533 07 9428130 9436394 CCT
Lele14g1931 14 25672658 25673497 Lele07g1533 07 9428130 9436394 CCT
Lele15g0407 15 2337441 2338622 Lele07g1533 07 9428130 9436394 CCT
Lele16g0432 16 2323134 2323862 Lele07g1533 07 9428130 9436394 CCT
Lele07g1533 07 9428130 9436394 Lele07g1533 07 9428130 9436394 ECH
Lele05g1473 05 9435277 9444263 Lele07g1533 07 9428130 9436394 hybridization
Lele06g1329 06 8503420 8514239 Lele07g1533 07 9428130 9436394 hybridization