Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1506 ATGAATTATCTGTATACAGTAAAAGAAGAGTACTTGGAACCATCTTCATCTGAAGTAGGAGGTGAGCTCTTAATGTTTCTACCTCAACAGCCGATACAGGGACTTCATGAAACAGGACCGCCTCCATTCCTCACCAAGACATTTGATATGGTGGACGACCCTTCAACCGATCACATAGTCTCGTGGATCAGAGGAGGATCAAGTTTTGTTGTTTGGGATCCATGTTCTTTCTCTGCCAATCTCCTTCCTAGATGCTTCAAGCACAACAATTTCTCAAGCTTTGTCAGGCAATTGAACACTTACGGTTTTAGAAAAATTGATTCAGACAGATGGGAGTTTTCAAACGAAGAATTCATCAGAGGACACAGGCATCTACTGAGGAACATACGAAGAAGGAGAGCACCTTCTCAGGTTACTCCATCCTCACAAAGACCGGGTCATTGTGTTGAAGTTGGTAGTTTTGGAGTAGAAGAAGAAATTATACGTTTAAGGTGTGACAAGCAAGAGTTAATGATGGAGCTTGTGAAGCTTAGACAACAGCAACAGAACACCAGAGCCTATCTTCAGGCGATGGAGCAGAGGTTACAAGGCACAGAAATGAAGCAGAAACAAATGATGTCTTTCTTAGCTAGAGCGTTGAAAAATCCTACTTTTCTCCACCAACTACTCCAACAGAGTAAGACAAAGGAACTGGAAGAAGCCATGACTAAGAAAAAAAGAAGGTCAATTGAGCCAGGACCAATTGATATTGTGGAATCAAGCAGTGAAAATGAGGGAAGGAATAATCCTGTTAAAGTTGAAGTTTCTGAGCTTGAAGTTCTAGCGATGGAAATACAAGGTCTTGGTAAGGGTAAGAGAGAACAGGAAGCACTTGAAACGACAAAGAGGCTTGACAGCGAACTTGATGAAGGATTTTGGGAAGAGTTTTTTAGTGAAAATGTTGTGGGTGAACTAGATATGCCAGGCGATGAAGGCAAAGGAGAATATGAAGGTGTAGATATCAACGTCTTGGTCAAGCGCTTAGATTACATCAGAAGTCCTGGAATATTGGACAAGAAGTAG 1062 0.4162 MNYLYTVKEEYLEPSSSEVGGELLMFLPQQPIQGLHETGPPPFLTKTFDMVDDPSTDHIVSWIRGGSSFVVWDPCSFSANLLPRCFKHNNFSSFVRQLNTYGFRKIDSDRWEFSNEEFIRGHRHLLRNIRRRRAPSQVTPSSQRPGHCVEVGSFGVEEEIIRLRCDKQELMMELVKLRQQQQNTRAYLQAMEQRLQGTEMKQKQMMSFLARALKNPTFLHQLLQQSKTKELEEAMTKKKRRSIEPGPIDIVESSSENEGRNNPVKVEVSELEVLAMEIQGLGKGKREQEALETTKRLDSELDEGFWEEFFSENVVGELDMPGDEGKGEYEGVDINVLVKRLDYIRSPGILDKK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1506 353 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1506 353 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Lele07g1506 353 MobiDBLite consensus disorder prediction 237 262 - -
Lele07g1506 353 FunFam Heat shock transcription factor 1 36 133 - -
Lele07g1506 353 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1506 353 Coils Coil 160 194 - -
Lele07g1506 353 Gene3D - 35 133 IPR036388 -
Lele07g1506 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 30 256 IPR027725 -
Lele07g1506 353 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1506 353 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1506 353 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1506 353 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1506 Lele-ChrLele07 9227709 9229184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1506 30 346 HSF AT3G22830 47.790 7.00e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele07g1506 HSF_DNA-bind 6.2e-31 CL0123