Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1501 ATGGTTCGACCTACGCTAATGAGTTCCACAACCCAAGATTACCTCCTCTTCTTCGCTTCTCGCGCGGAACCTTTCTTCTCGCTCAAGCTTAGAGTTCTCTCTTTTGCAGTATTTACTGATGTATTGGATGGTTGGGTGGGTAGGGGATGGGAACTGATTGAAATGCTAAACAAAATGGTTGTTGGGAACTGGGTAGGGATGAGGTCTGCATGGTTCTTTATTGACAAGGAGAAAGAGACTTTAGTTTGTAATATGAGTCAGAAGAAGAACCCTCTTGTGTTTCTAGACGTCTCAATGGATGGGGATCCTGTAGAAAGATTTGTTATTGAGCTTTTTGCCAGTATTGTTCCTAAGACTGCTGAGAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTCTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGAAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGATGGTCCTGGTGTTTTATCCATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAACTAGTGGGGACACCAGATGGGAAACCTGTCCAGCCAGTTAAGATAATTGATTGTGGTGAAACGACTGAAGCGAAAATTCAGCAAAAAATTGGGAAAGAGAAAGGTAAAAAGAGAAAATCTGGGGAATCCTCAATTTCTGGTGATAGTACTGACAAAAAATCCAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCAACATCTGATTCATACAGCTCTGATAGTGATAGTGACTCTGTTTCTTCTGAATCTGACTCAGATTCAGGGTCAAATTCGTCGCTTTCTGATTCAAGTTCCTCTAGCTATGGTAAACATCGGAAGAGGAAACCTGTGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGAAGAAATGGACGAAAGGAAAAGAGAAGCCGGCATAATAGACGATCTAGACGCAAAAGCTCAGCAGATTCAAGTGATACTGAAAGTGATAGTATTAGTGGTGGTGACAGTAGTTCTGATGATGAGAGAGCTCACCGCCGTGTCTCTGGTCATAGAACACATGCTGACAACAAACAAAAAAGAAATTTAGAAACAGGAAAGCAATCTCCCAGCCCTCCTTTAGTTAGAACTGCTCCAGATCAAGGGAAAGATTCCAAGGTCAAAAGAATTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGAGTTTCTGAATAATGGGCATGATAGTGAAGCCAAATTCAGTAAACTTGCTAAGCAACCCACTCATTTGGATGATTCTAATGAAAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTCCCACTAGGGAGTTAGTTGAGCAAAACCAAGGAGGTGCTTTGTTGACAAGCACCCGCCAACCTGCTGCCTCCAAACACAGTCAGGGTTTGTCAAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGGCGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCACCCCATTCCTATCGCTATGGTGATAGAAATATAAGAAGGAACTTCGACAGGCGTACAAGCTACAGAAACTACTCTGAGCATTCCCCACAGAGACGCTATGGAAGCCCTCCACGCAGGAGCCGTCCAAGATACCAAAGCAGAAGAAGCCGGAGTAGGAGCATCTCTCACAGTCCAGTGCGTGGCCATTTTAGGGACCGTGGTCGCAGCCAGAGTCCAATACGTAGCCCCACTCCAGACGACAGGCGACCTCCAATAAGTGATAGATTGAAATCCCGACTTGGTCCTCAAAGTGTTCGGCACTCTCCAGACAGAAGGGCAAGGGCCAGGTCCAATTCCAGGGATCATTTGTCTCCCTCTAGATCCCCTGATGCTACCCCACCTAGGCGTCATGATAAAAGGACTTCTGCATCTCCAAGCAGGTCTAGATCTAGTTCGTCATCCGGACAGAAGGGATTAGTTTCCTATGGCGAGGCCAGTCCTGATTCCGGGGCAAGGTAG 2235 0.4452 MVRPTLMSSTTQDYLLFFASRAEPFFSLKLRVLSFAVFTDVLDGWVGRGWELIEMLNKMVVGNWVGMRSAWFFIDKEKETLVCNMSQKKNPLVFLDVSMDGDPVERFVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESIYEGKFADENFILKHDGPGVLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVSGLDLLKKIELVGTPDGKPVQPVKIIDCGETTEAKIQQKIGKEKGKKRKSGESSISGDSTDKKSKGKRKTSSKDLRKRRRYSTSDSYSSDSDSDSVSSESDSDSGSNSSLSDSSSSSYGKHRKRKPVKRSRHKQGKKRRNGRKEKRSRHNRRSRRKSSADSSDTESDSISGGDSSSDDERAHRRVSGHRTHADNKQKRNLETGKQSPSPPLVRTAPDQGKDSKVKRIEDKQSHEEGELSPENSEFLNNGHDSEAKFSKLAKQPTHLDDSNENRGASPRRSDAMSPTRELVEQNQGGALLTSTRQPAASKHSQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSPHSYRYGDRNIRRNFDRRTSYRNYSEHSPQRRYGSPPRRSRPRYQSRRSRSRSISHSPVRGHFRDRGRSQSPIRSPTPDDRRPPISDRLKSRLGPQSVRHSPDRRARARSNSRDHLSPSRSPDATPPRRHDKRTSASPSRSRSSSSSGQKGLVSYGEASPDSGAR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1501 744 MobiDBLite consensus disorder prediction 514 547 - -
Lele07g1501 744 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 160 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 206 218 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 219 234 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 MobiDBLite consensus disorder prediction 348 383 - -
Lele07g1501 744 CDD cyclophilin_ABH_like 91 257 - -
Lele07g1501 744 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 104 257 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 MobiDBLite consensus disorder prediction 264 744 - -
Lele07g1501 744 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 94 258 IPR002130 GO:0000413|GO:0003755
Lele07g1501 744 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 85 266 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 613 636 - -
Lele07g1501 744 SUPERFAMILY Cyclophilin-like 85 259 IPR029000 -
Lele07g1501 744 MobiDBLite consensus disorder prediction 482 503 - -
Lele07g1501 744 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 93 258 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 314 344 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 401 428 - -
Lele07g1501 744 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 143 160 IPR020892 GO:0003755|GO:0006457
Lele07g1501 744 MobiDBLite consensus disorder prediction 550 604 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 264 296 - -
Lele07g1501 744 Gene3D - 80 267 IPR029000 -
Lele07g1501 744 MobiDBLite consensus disorder prediction 659 695 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 446 468 - -
Lele07g1501 744 MobiDBLite consensus disorder prediction 717 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1501 Lele-ChrLele07 9160601 9165943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1501 109 255 U-box Gene Family AT5G67530 48.322 3.98e-31 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1501 07 9160601 9165943 Lele07g1501 07 9160601 9165943 ECH
Lele05g1437 05 9151374 9161085 Lele07g1501 07 9160601 9165943 hybridization
Lele06g1298 06 8273279 8282363 Lele07g1501 07 9160601 9165943 hybridization