Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1498 ATGGAACTGAGTGAAAGTTGGCCGCTTCAGGAAGATGGGGAACCAACCAGATCTTATCCTGAATTTTGGGCTTTAGCTATTGAGGTGGCCCATCTGAAACATGGGCCTATGGGCCCAGAGACTTCTCTGGTGTTCGATCTCTCAATTTTAGGGGATGAACTGCTCCTGTTTAAGCACAAATACGTTATACACCCTCTCTTTCTAACGGGATTTCTTGTTTTGCTCTTGATTTCCTTGAAATGTCTTTGCCATGTTCTGAGGAAGAAATTGGAAATGGCGGGAAAAGGAGGCAAGGGGCTTTTGGCTGCAAAAACCACGACCGCTAACAAGGACAAAGATAAGGATAAGAAAAGGCCTGTTTCCAGGTCATCCCGTGCCGGAATCCAGTTTCCTGTGGGTCGTATTCATAGACAGCTGAAACAAAGGATCCAAGCAAATGGGCGTGTTGGGGCCACGGCTGCAGTTTACTTGGCGTCCATTCTGGAATACCTGACGGCTGAAGTTCTGGAGCTTGCTGGAAACGCAAGTAAAGATTTGAAGGTGAAGAGGATCACACCAAGGCATCTGCAGCTTGCTATCAGAGGAGATGAAGAACTTGACACCCTTATTAAGGGCACCATTGCTGGCGGAGGTGTCATCCCTCATATTCACAAGTCCCTCATCAACAAGACCTCCAAGGAATGA 684 0.4737 MELSESWPLQEDGEPTRSYPEFWALAIEVAHLKHGPMGPETSLVFDLSILGDELLLFKHKYVIHPLFLTGFLVLLLISLKCLCHVLRKKLEMAGKGGKGLLAAKTTTANKDKDKDKKRPVSRSSRAGIQFPVGRIHRQLKQRIQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1498 227 CDD H2A 118 223 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 SMART h2a4 107 227 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 MobiDBLite consensus disorder prediction 107 122 - -
Lele07g1498 227 SUPERFAMILY Histone-fold 89 204 IPR009072 GO:0046982
Lele07g1498 227 Pfam C-terminus of histone H2A 197 226 IPR032454 -
Lele07g1498 227 MobiDBLite consensus disorder prediction 104 123 - -
Lele07g1498 227 Gene3D Histone, subunit A 106 227 IPR009072 GO:0046982
Lele07g1498 227 FunFam Histone H2A 106 227 - -
Lele07g1498 227 Pfam Core histone H2A/H2B/H3/H4 106 195 IPR007125 GO:0003677
Lele07g1498 227 PRINTS Histone H2A signature 118 140 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 PRINTS Histone H2A signature 177 191 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 PRINTS Histone H2A signature 148 163 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 PRINTS Histone H2A signature 204 222 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 PRINTS Histone H2A signature 163 176 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lele07g1498 227 PANTHER HISTONE H2A 111 223 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1498 Lele-ChrLele07 9144897 9146607 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1434 05 9125000 9126104 Lele07g1498 07 9144897 9146607 hybridization
Lele06g1295 06 8259444 8261130 Lele07g1498 07 9144897 9146607 hybridization