Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1488 ATGGAAGTGATAGGTGTGAAGAAGGAGAAGATGGGTTTCGAGGAAACAGAACTCAAGCTTGGATTGCCCGGAAATAATGGAGGAGCCACCGAACCGGAAGTCGTCAGAAAGAGAGGTTTCTCTGAAACTGAACCAGAGACTGTGGACTTGATGTTGAATCTCTCATCGTCTAAGGAATCAGCAAATCCATCTGAGAACCTCAAGAAGGAGAAGACCCTTCTGCCCTCTGATCCTGCTAAGCCTCCCGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGGAAGAACATATTAAAGAGCAGTGGAGAAGAGAAAGAGAAAGGAAGCCCTAATAATGGAAGCTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATTGGCAACTGTGGATCCCAAGGAATGAAGGATTTCATGAACGAGAGCAAGCTGATGAATCTCTTGAACAGCTCCGACTATGTCCCAACCTATGAAGACAAAGATGGCGACTGGATGCTTGTCGGCGACGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGCATCATGAAAGGCAAGGAGGCTATCGGACTTGCTCCGAGAGCCATGGAGAAGTGCAAGAACAGAAGCTAG 705 0.4809 MEVIGVKKEKMGFEETELKLGLPGNNGGATEPEVVRKRGFSETEPETVDLMLNLSSSKESANPSENLKKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNILKSSGEEKEKGSPNNGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGSQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1488 234 FunFam Auxin-responsive protein 111 226 - -
Lele07g1488 234 MobiDBLite consensus disorder prediction 48 62 - -
Lele07g1488 234 Gene3D - 111 228 - -
Lele07g1488 234 MobiDBLite consensus disorder prediction 19 88 - -
Lele07g1488 234 Pfam AUX/IAA family 16 225 IPR033389 -
Lele07g1488 234 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 221 IPR003311 GO:0005634|GO:0006355
Lele07g1488 234 SUPERFAMILY CAD & PB1 domains 112 215 - -
Lele07g1488 234 ProSiteProfiles PB1 domain profile. 116 216 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1488 Lele-ChrLele07 9080580 9082120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1488 103 224 B3 DNA Binding Superfamily AT4G23980 31.148 2.34e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele07g1488 AUX_IAA 1.8e-80 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1424 05 9046802 9048346 Lele07g1488 07 9080580 9082120 hybridization
Lele06g1286 06 8198943 8200512 Lele07g1488 07 9080580 9082120 hybridization