Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1482 ATGTTTCAGTACACTACTATAATAATAATGCAGGACCCTGGAGGATCTGTGGTGGATCTTCAACCTACTTTAAAGAAGAAAACTGCGGTTTCAAGAAGCTGGATTCTGCTGGACTGCAATGGCAACGGCACTATGTTGGATGTGGACAAGTACGCTATTATGCGCCTGGTTGAAATTAACGCGAGAGATCTTCGAATTCTTGATCCGCTGTTATCGTATCCTTCTACCATTTTGGGTAGAGAGAAGGTCATTGTCCTCAATTTAGAGCATATCAAAGCTATTATCACCGCAGAGGAGGTGTTACTCAGAGACCCGCTGGATGATGATGTTATTCCTATTGTCGAGCAACTTCAAAGAAGGTTGCCCAAAGTGTCTGGCACACGGCCAGGCCAAGGAGAAGGAGAAGAGACGTGTGCCCAAGAAGTTGAAGGCGACGAAGAAAATGAATTTCCGTTTGAATTCCGTGCCCTGGAGGTTGCATTAGAGGCAATTTGTAGTTTTCTTGATGCGCGGACGAGAGAGTTAGAGACTGCGGCTTATCCAGCTTTAGATGAGCTCACCTCTAAGATTAGCAGTCGTAACTTGGATAGAGTACGCAAACTGAAAAGTGCAATGACCACGTTGACAAATAGAGTTCAAAAGATAAGAGATGAACTAGAAAATCTACTCGATGATGATGATGATATGGCCGACCTTTACTTATCGAGAAAGATGGCTGGCTCATGTTCCCCTACTAGTAGCTGTGATGCTCCCAATTGGATTCTTAGCTCTCCAACTATAGGCTCAAGGGTCCGTAGATCAAGCAGAGCAAGTGCAACAACATTTCAAGGGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGGCACATTAAATAAACTGACCACACTGCGAGAATATATTGATGACACGGAAGATTACATCAACATACAGCTTGACAATCACCGTAACCAGCTGATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTGTGCTTGTCCATATATTCCTTGGTGGGTGCAATATTTGGCATGAACATCCCGTACACCTGGAGACAAGGACACGGTTATATGTTCAAATGGGTGGTAATCTTTACGGGAATATTCTGTGGATCCTTGTTTTTGTCCATAGTATCATATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1194 0.4372 MFQYTTIIIMQDPGGSVVDLQPTLKKKTAVSRSWILLDCNGNGTMLDVDKYAIMRLVEINARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLLRDPLDDDVIPIVEQLQRRLPKVSGTRPGQGEGEETCAQEVEGDEENEFPFEFRALEVALEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKSAMTTLTNRVQKIRDELENLLDDDDDMADLYLSRKMAGSCSPTSSCDAPNWILSSPTIGSRVRRSSRASATTFQGENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWRQGHGYMFKWVVIFTGIFCGSLFLSIVSYARRKGLVGS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1482 397 Gene3D Magnesium transport protein CorA, transmembrane region 113 327 - -
Lele07g1482 397 Coils Coil 198 225 - -
Lele07g1482 397 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 395 IPR039204 -
Lele07g1482 397 FunFam Magnesium transporter MRS2-1 22 105 - -
Lele07g1482 397 Pfam CorA-like Mg2+ transporter protein 283 383 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele07g1482 397 CDD Mrs2_Mfm1p-like 34 394 IPR039204 -
Lele07g1482 397 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 333 383 IPR045863 -
Lele07g1482 397 Gene3D - 17 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1482 Lele-ChrLele07 9040489 9043865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1482 8 370 MRS2 Gene Family AT5G64560 73.297 1.15e-169 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1482 07 9040489 9043865 Lele13g1952 13 27056538 27058744 CCT
Lele07g1482 07 9040489 9043865 Lele14g1881 14 25382179 25386665 CCT
Lele07g1482 07 9040489 9043865 Lele15g0458 15 2657326 2659534 CCT
Lele07g1482 07 9040489 9043865 Lele16g0480 16 2627068 2631465 CCT
Lele05g1419 05 9002375 9013182 Lele07g1482 07 9040489 9043865 hybridization
Lele06g1280 06 8155041 8165261 Lele07g1482 07 9040489 9043865 hybridization