Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele07g1481 | ATGGCGAATCAGGTAGTCAAAGTGAAGAGGGAAACGATTGCAGCATGCATGACCTGCCCACTCTGCAACGAGTTGTACAAGGAGGCCACCACTATATCTGAATGCCTGCATACGTTTTGCAGGAAGTGCATATATGACAAAATTACAGATGAGGAATTGGAATGCTGTCCAATCTGCAATATTGATTTAGGCTGTGCTCCGCTGGAGAAATTGAGGCCAGACCACAGTTTGCAAGATGTAAGGGCTAAAATTTTCCCTTTGAAGCAAACAAAGGAAAAGGAACCAGAAGTTGTCCCTCCAGAACCATTACCAGCTAGAAGAAAGGAAAGATCACTTTCATCTTTGGTTGTCAGCACTCCCAGAGTATCATCAGCACAGGCAACCATGACAGGAAGAAGAACAAAGCCTACAAGAAAGGCTAGTGCTCGCTCCACTAGTTTTTCCGTTGGAAAAACCATTATAAAAGAGGAAGATTCAGTGGAAGATCATCCAGAGAGTTCGAGCTCACCCGATACATCCAACAAGGTTTCTCAGACTACTAGACAGAACTCGTCCCCTCATGATGCAAGCCAATCTGTTCCCAATAAGGAGAAAAATAATGGGGCTGAACCTTGGGAAGCAAAGGATCTTTGGAAACCTTTGAATTGTTTGGTGGAGATTGCAAGTAGGAGTAAATCTTTCAAGTCCAACATACAAGGATGTGATGCTAAACAAGAACCTACTCAAATAAATGAGAATGATTCTCAAGTACAAAAGCCCAAAATTAAGGACAACAGGCGAAAGTCAAAAGTTGAGGATGAAAAGATCGTCACTGATTCTGCTTCTCCAGATACAGAAAAGGCAAATAAATCGCGCAGAAATCGCCGAAAGAAGGAACCTGTTGTGGGTGAATCAAGCATATCACCCCAAGCTGTGCTGGATGCAAACAGTGCTAAAATGAAAGAAAGAACTGGTCCAATATGGTTCTCCTTAGTAGCCTCTGAAGACCAGGACAAAGATGCACCACTACCACAAATTTCTGCAAATTACTTAAGAATAAAGGATGGAAACATGCCAGTCTCATTTATCCAGAAGTACCTGATGAAGAAATTAGATCTGGCCAGTGAAGATGAGGTTGAGATTAAATGCATGGGACAACCAGTGGTCCCTACACTGCAACTGAATAACTTGGTTGACTTGTGGCTGCAAACAACATCGCCATCACAGAGAATCCCAGTAGCCATTGGATCATCAGCAAAAGATTTTGTTATGGTTCTGACGTATGCTCGCAAGCAGGCCCCGCCGCCTTGA | 1290 | 0.4326 | MANQVVKVKRETIAACMTCPLCNELYKEATTISECLHTFCRKCIYDKITDEELECCPICNIDLGCAPLEKLRPDHSLQDVRAKIFPLKQTKEKEPEVVPPEPLPARRKERSLSSLVVSTPRVSSAQATMTGRRTKPTRKASARSTSFSVGKTIIKEEDSVEDHPESSSSPDTSNKVSQTTRQNSSPHDASQSVPNKEKNNGAEPWEAKDLWKPLNCLVEIASRSKSFKSNIQGCDAKQEPTQINENDSQVQKPKIKDNRRKSKVEDEKIVTDSASPDTEKANKSRRNRRKKEPVVGESSISPQAVLDANSAKMKERTGPIWFSLVASEDQDKDAPLPQISANYLRIKDGNMPVSFIQKYLMKKLDLASEDEVEIKCMGQPVVPTLQLNNLVDLWLQTTSPSQRIPVAIGSSAKDFVMVLTYARKQAPPP | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 166 | 198 | - | - | |
Lele07g1481 | 429 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 101 | IPR013083 | - | |
Lele07g1481 | 429 | ProSiteProfiles | Zinc finger RING-type profile. | 19 | 60 | IPR001841 | - | |
Lele07g1481 | 429 | SMART | ring_2 | 19 | 59 | IPR001841 | - | |
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 88 | 206 | - | - | |
Lele07g1481 | 429 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 427 | IPR044807 | GO:0004842 | |
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 88 | 108 | - | - | |
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 250 | 283 | - | - | |
Lele07g1481 | 429 | ProSitePatterns | Zinc finger RING-type signature. | 35 | 44 | IPR017907 | - | |
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 112 | 152 | - | - | |
Lele07g1481 | 429 | SUPERFAMILY | RING/U-box | 14 | 83 | - | - | |
Lele07g1481 | 429 | Pfam | Zinc finger, C3HC4 type (RING finger) | 19 | 59 | - | - | |
Lele07g1481 | 429 | MobiDBLite | consensus disorder prediction | 236 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele07g1481 | Lele-ChrLele07 | 9032793 | 9037476 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele07g1481 | 2 | 347 | C3H Transcription Factor Family | AT2G30580 | 52.000 | 8.74e-109 | 322 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele07g1481 | 07 | 9032793 | 9037476 | Lele13g1951 | 13 | 27052421 | 27055365 | CCT | |
Lele07g1481 | 07 | 9032793 | 9037476 | Lele14g1880 | 14 | 25379206 | 25379787 | CCT | |
Lele07g1481 | 07 | 9032793 | 9037476 | Lele15g0459 | 15 | 2660548 | 2663386 | CCT | |
Lele07g1481 | 07 | 9032793 | 9037476 | Lele16g0481 | 16 | 2636521 | 2637102 | CCT |