Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1477 ATGGCCGTCGACGCCCTTCACCTTCGTCCCCATTCTCCCTCCGATCCTCCCCCTCTCCCGCCCAAGGCCCTCCGTTTTAGAGGCGTCCGCAAGCGACCCTGGGGCCGATTCGCCGCCGAGATCCGCGATCCCTGGAAGAAGACGCGCAAATGGCTTGGAACCTTTGATACCGCCGAGGAGGCTGCTCGGGCCTACGATGAGGCTGCCAGGACTCTTCGTGGACCCAGGGCCAAGACGAACTTCGTCTATGCCGCTGTTCCCGTCGCTACGTCGCTCCCGATGCCACCGGCGGCAGCCTGTACTGCCGGTGGCGGTCATGGTGGAGAGACGTCTGGGAGGCCCGTGGGGTTTTGGAGGGCTCCGGCGTATCATGCGGCGGGCGCCACCGCAGGAGTGCCGGTGAGATCGGAGTATAAGGGATACGAGTTGGAGAATGTGGATGTGGTGGTGGGCGAGGAGAGAAAGGTGCGAAAAGAGAAGAAACCGTTGTTGCTCGATCTTAACCAACCACCTCCACTCTTTTGA 525 0.621 MAVDALHLRPHSPSDPPPLPPKALRFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARTLRGPRAKTNFVYAAVPVATSLPMPPAAACTAGGGHGGETSGRPVGFWRAPAYHAAGATAGVPVRSEYKGYELENVDVVVGEERKVRKEKKPLLLDLNQPPPLF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1477 174 MobiDBLite consensus disorder prediction 1 24 - -
Lele07g1477 174 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 102 - -
Lele07g1477 174 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 CDD AP2 25 81 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 SUPERFAMILY DNA-binding domain 26 82 IPR016177 GO:0003677
Lele07g1477 174 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 FunFam Ethylene-responsive transcription factor 2 25 83 - -
Lele07g1477 174 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Lele07g1477 174 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1477 Lele-ChrLele07 9016606 9017130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1477 22 81 AP2-EREBP Transcription Factor Family AT1G50640 86.667 4.78e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1477 AP2 3.4e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1417 05 8983217 8986615 Lele07g1477 07 9016606 9017130 hybridization