Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1468 ATGGAGTTCAGGTACCCAGAAGAGTCAAAGAGCTGGAGCGAAGAAAGTGATGAGCGACCGGAGAATAACAATGATGAAAGGGGAAGTGGAAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGATTCACCACAGCACAAGCTTTGGGTGGACACATGAATATTCACAGGAAAGATAGAGCCAAATCCAGCAAGCCCAGTAATTTTCCTGCTTCCACTTCAACCAAAGTGCTTGACGACCATGAGATCGACCATGCACTTTCAAGTTTTCCACCACCTGGGAATTACTTATTATTAGATCACAACAGCAATAATTATAATTACCCTCCTTCCCAAATTTCTTTTCCTGCAGTAGATCAAAGGGATCGGGACTTGTTCGGAGGAGATTATAATTGGAGGACTGGTTTGAGTTTGTCTAATCCACTTTATGGGCGTGATAATAAAGACAAGACTGGAGGTAGCGGTGAAGAAGATGGTCTCGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 510 0.4333 MEFRYPEESKSWSEESDERPENNNDERGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSSKPSNFPASTSTKVLDDHEIDHALSSFPPPGNYLLLDHNSNNYNYPPSQISFPAVDQRDRDLFGGDYNWRTGLSLSNPLYGRDNKDKTGGSGEEDGLDLELRLGYHS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1468 169 MobiDBLite consensus disorder prediction 1 28 - -
Lele07g1468 169 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Lele07g1468 169 Pfam C2H2-type zinc finger 33 57 - -
Lele07g1468 169 Gene3D Classic Zinc Finger 9 87 - -
Lele07g1468 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Lele07g1468 169 PANTHER OS07G0101800 PROTEIN 7 168 - -
Lele07g1468 169 MobiDBLite consensus disorder prediction 1 31 - -
Lele07g1468 169 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1468 Lele-ChrLele07 8952070 8952579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1468 33 67 C2H2 Transcription Factor Family AT5G43540 74.286 2.52e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele07g1468 zf-C2H2_6 1.4e-05 CL0361