Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1465 ATGGAAAAGTTCCTCTGTGAATTATTACTGGATTCCACGCAACCGATTTCTGAGCGCTTCAGGGCTCTCTTCTCTCTCCGCAATCTCAAGGGTCCCTCCCCTCGCAACGCCCTTATTCTCGGTCAGTTGATGCTTATACTTTTCTATCCTTCTTTTTCTTTCTCTTCCATGTTCTTGAATGTTATTCTAAAGAAAGGCCAACGGATTGTTTCGTTTTGTACTATCCTATTTGGTGCGCCCTTTTGTATGTCGACTGCCGCAGAAGCTCTTGGTGCTATTGGTTCAGATGGTAATGTTCCTCTACTGAAAAGTAGTTTGGGTTTAGATCCAGCTCAGGAGGTTCGGGAAACATGTGAATTGGCTCTTCATCGTATTGAGCATTTGAAAGATGCTGGTAGTAGTGATGAATTGTCTACATCTTATGCATCACCTTTTAAGTCTGTTGATCCTGCAGCACCAGCTGCCTCGTGTTCTTCTGCGGATCAATTAAGGAAAGTACTTCTGGATGAAGAAAAAGGAATGTATGAACGGTATGCAGCTCTTTTTGCCCTTCGAAATGATGGTGGAAATGAAGCTGTTGCTGCTATAATTGATTCCTTGGGTTCCAAAAGTGCTCTCCTTCGCCATGAGGTTGCTTATGTTTTGGGCCAATTACAAAACAAAGCTGCTTCGGCTGCACTATCCAATATGCTTAAGGATGGGAATGAGCATCCAATGGTCAGACATGAAGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCGAAGTGTAGCACTTCTTGAGGAATTTGTGGCAGATCCGGAGCCTCTTGTCTCACAAAGCTGTCAAGTTGCTCTGAGTATGCTAGAATTTGAACGATCAGGGAAACCTTTTGAGGAGTTGGATGACTTTGCAGAAGGTGGCGCGATTTCAGGGAAAAACATTGACAGAACCATCGGAGACCCCAAGTGTAGTGAGCCCATCACTATAAATTCCTCTGCCCAGAAAGCCGACAGTGAAAGACAGAAAGGAGAGGTTGGAAGGGGACAATGGCGAATCCTCAAAAGCCATGGAAGGCAGAATATGCGAAGTCAGGACGATCGTCTTGCAAGACTTGCAAGAGTCCCATCGACAAAGAGACGTTTCGCCTTGGCAAGATGGTTCAAGCCACCAAGTTCGATGGTTTCATGCCGGTCTGCGTCTACCCATTTCTTCTCTGTTCCCCCATTCACCCCCTCACTCTTTCTTCTACGCTTCTTATTTCTTGAAACCCTGAAATCTTGTGGTTTTGTTACCTTCCTCGCATTATTCTTGCAGATATGTTTTCTCAAATGCGGGGAGGTTGCAGAGTCGAAGGGGGTTGAGAGATTTTCTTCAACAAAAAGCCTTTCTCGCATGATGTATTATCTGAGTTTAGCAGTATATTCAGCCCCTTTAATCTCTGAAATGCTGATAACATCTCATGGACTATTCGAGCTGTTCTTGTCTATATTTGGATTATTTAATCTCTCTGGTACTGGTTCTTTAAGGAGATTATCAACTTATTATTCGGCTCTGGATCATTTTGGGGCGCGTAGTTTGCATTTCATTGCTAATGTTAGTGTGCACTATAAAGTCTCAACTGATGATGTTGAGAGCATAGAGGTGCTCCGTTGGGAAGATCAACAGAAAATCAGAGAATATGTAGAGAGTGCTGCACAACCAAAGTCAGATACTATTAAAGATATGGAGCATGGTATTGAAGTTTCACAAACTTCTCGTGCTACATGCAAGCATTGAATCGATCTTTATGAATTTGCCACCTCTCCCTTTTATCTTGGGGTTCGTATATCTAGTAAGCCTAATGGTCAAGGTGCTAAAGGATTGGCTTGGCACCATGCAAACTGTCTCATGGAATTATCTCCATCAATAAAAGTTGAAAAGTTGCCTGGATGGGATGGTCTCTCACCTTCTGATCAATCAGCTGTCAATGCCGTAGCTAAGAAACTTCATTACGTTGAGGCTCAAGATTTTAAGGATGCCGGATGTGAATCAACTTCTAAAGCTGGCACAAAACGCAGGAATGATGCTGGTAGTAACCCCAAGTCAAAAGTTGCTAAGGCTGAGGGAGATGCTTCTGATCTGGAGAGTAGACTGGAGGCCCAAACCAAAGAACTCTGGACTCTGAAAGATAATTTGAAAAAGCATGTGACAACTGCTGAGTTACGTCTAATGCTGGAACACAATGGTCAAGATTCAACAGGATCAGAACTTAATTTGCGTGACCGCTGTGCTGATGGAATGATGTTTGGACCACTTGCTTGTTGCCCAATATGTTCTGGTTGTCTCCGTTATTCTGGAGGAATGTACCAGTGCATTGGGTATGTTTCTGAATGGAGCAAATGTTCCTACTCTACTAATGAACCGAAACGACTTAGACAGAAGTGGAAAGTTCCAGAGGGAACAGACAATCAGTATCTTAAACAGTGGTTCAAATCACAAAAGGCTGAGAGACCGGTTAGGATGGTGCCTCCTCGTTCATCAAATTCTGAAAGTCAAATCATTGCTTGCCAGCATCAATCTTCAAGCAGTGAAGATTTGGGAGAATTGAGAGTTGCTATCACTGGATATCCTAAAGAATCTATTGTGAAATGGAAAAACAAAGTTGAGGAGGTTGGTGGTGTGCTTCATGCTAAAGTAAAGAAAGATACTAGCTGCTTGGTGGTGATTGGGGCACTGGATGAGCAAGATGCTGAAATGCTGAAGGCAAAGAGGATGAAAGTGCCTATTGTCAGAGAGGATTATCTGGTTGATTGTGTGGAAAGAAAGAAGAAGCTTCCGGTTGCCTTATACAAGGTTGAAGCCACTAGTGAAGCCTCTAGCATGGTCACCATCAAAGTGAAGGGTCGAAGTGCTGTTCATGAGGCCTCTGGCCTACAGGATTCTGGTCACATACTTGAGGAAGGAAAAAGCATATTTAATACAACTCTGAATATGTCTGACTTATCTAGTGGTGTTAACAGCTACTACATTCTCCAAACAATTCAAGAAGATAAGGGATCAGATTGCTATGTGTTCCGTAAATGGGGTCGAGTTGGTAATGACAAAATTGGAGGAAATAAACTGGAGAAGATGTCAAAAGCAGATGCCATTGCCGCATTCAAACGATTATTCTTTGAGAAGACTGGAAACCCTTTGGAGGCTTGGGAACAAAAGAATTTTCAGAAGCAACCAGGCAGATTTTTCCCATTAGATATTGATTATGGGGTTAACAAACAGGTTACAAAGAAAAATAAAAAAGATGCAGACAGTAAACTGGCCCCACCATTACTAGAATTGATGAAGATGCTTTTCAATGTGGAAACATACAGGGTCGCCATGATGGAATTTGAGATAAATATGTCTGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATTCAGAAAGGGTTTGAAGCTTTAACAGATATACAGAATCTGTTAAGTAATAACAATCCCAATCCTTCAGTCAGAGAAAGCTTGCTTATTGACGCTAGCAATCGGTTTTTCACTGTAATCCCTTCTATTCATCCACACATTATTAAGGACGAGGAAGATTTTAAGTCAAAGGTGAAAATGTTAGAATCACTTCAAGAAATTGAAATAGCTTCAAGATTAGTTGGATTTGATATAGATGGTGATGACTCCATTGATGATAAGTATAAGAAGCTTCACTGTGACATTTCTCCACTTCCTCGTGATAGTGAAGATTATCGTCTGATTGAGAAGTTTCTCCGTACTACTCATGCCCCTACACATGCGGAATGGAGTCTTGAGCTAGAAGAAGTTTTTGCGCTTGAAAGGGAAGGAGAATTTGACAAGTATGCCCCTTACAGAGAAAAGCTGGGTAACAAAATGCTTCTATGGCATGGGTCTAGGTTGACAAATTTTGTCGGTATACTTAACCAAGGACTGAGAATTGCACCTCCTGAAGCCCCAGCAACTGGCTATATGAAAAATCCTGTTGGTCTGATGCTTTTGAGCGAAGTTGCCCTTGGAAATATCTCTGAGCTTAAGAATGCTAAGGTCAGTCTGGAGTACTCTGGTTTAATTCCAATTAAAGTACCTGATGAATCGGAATTTGTAAGGTGGAGAGATGACGTCATTGTTCCTTGTGGAAAACCAGTGCCATCAAGAGTCAAGACTTCTGAGCTCATGTACAACGAGTTTATTGTTTACAATACTGCTCAAGTTAAGATGCAGTTCTTGTTGAAGGGTGATGAAGGGTCTCATTTTGGCATTGTAGGTGGTGATGGAGATGAGGTGTTTGTGGGGGCCCTGAATGCACAAGATGCTATATGTGGTTTGCATGTGTCATGTGCAAAGTTGACACTGTTAACTGATGTTGATGACATCATGAAGATGATTAGTAATAGTGGGAATGGAGGGTCTGCGTCTCCTTGCGGGGCATGCAAGTTTCTGAGAAGGAAGTGTGCGGCTGATTGTATATTTGCGCCTTATTTCTGCTCCGAACAAGGCCCTAGTAGTTTTGCCGCCATTCACAAGGTGTTTGGAGCTAGTAATGTTTCCAAACTTCTCTTGAACTTACCTGCTCATGATCGTTGTGAGGCTGTCATCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTATCCCACATTTTTGCCTTGCAACAACAGGTGGCATGCTTGCAAGCACAGCTGATGCAAGCCAAGGCGCAGTTGGCTCAGAAAAGCATGGAGAACAATAATGAAGTGTACTGGGGAAGGAATAATGGTTATGGGCAAACAATGAATCCAATGTATGGAACTAGTTACACCAACATGAACCCTATATCTCCTCAGAGTTCTCTTGACTCCATTGATTACTCCAGAATCCACGATAATGGATCCATGATGAGTAGTTTGCAGCAAGAGGGTTTCTCTGTCCAGCAACAAGCTCGCTCCAGGAAAAGCCCATCTTATGATAGCAATGACTTGAGCGAGCTTCAAGAGCTAGCACTTAGAATGATGAGAAACTAG 4998 0.4252 MEKFLCELLLDSTQPISERFRALFSLRNLKGPSPRNALILGQLMLILFYPSFSFSSMFLNVILKKGQRIVSFCTILFGAPFCMSTAAEALGAIGSDGNVPLLKSSLGLDPAQEVRETCELALHRIEHLKDAGSSDELSTSYASPFKSVDPAAPAASCSSADQLRKVLLDEEKGMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLRHEVAYVLGQLQNKAASAALSNMLKDGNEHPMVRHEAAEALGSIADDRSVALLEEFVADPEPLVSQSCQVALSMLEFERSGKPFEELDDFAEGGAISGKNIDRTIGDPKCSEPITINSSAQKADSERQKGEVGRGQWRILKSHGRQNMRSQDDRLARLARVPSTKRRFALARWFKPPSSMVSCRSASTHFFSVPPFTPSLFLLRFLFLETLKSCGFVTFLALFLQICFLKCGEVAESKGVERFSSTKSLSRMMYYLSLAVYSAPLISEMLITSHGLFELFLSIFGLFNLSGTGSLRRLSTYYSALDHFGARSLHFIANVSVHYKVSTDDVESIEVLRWEDQQKIREYVESAAQPKSDTIKDMEHGIEVSQTSRATCKHXIDLYEFATSPFYLGVRISSKPNGQGAKGLAWHHANCLMELSPSIKVEKLPGWDGLSPSDQSAVNAVAKKLHYVEAQDFKDAGCESTSKAGTKRRNDAGSNPKSKVAKAEGDASDLESRLEAQTKELWTLKDNLKKHVTTAELRLMLEHNGQDSTGSELNLRDRCADGMMFGPLACCPICSGCLRYSGGMYQCIGYVSEWSKCSYSTNEPKRLRQKWKVPEGTDNQYLKQWFKSQKAERPVRMVPPRSSNSESQIIACQHQSSSSEDLGELRVAITGYPKESIVKWKNKVEEVGGVLHAKVKKDTSCLVVIGALDEQDAEMLKAKRMKVPIVREDYLVDCVERKKKLPVALYKVEATSEASSMVTIKVKGRSAVHEASGLQDSGHILEEGKSIFNTTLNMSDLSSGVNSYYILQTIQEDKGSDCYVFRKWGRVGNDKIGGNKLEKMSKADAIAAFKRLFFEKTGNPLEAWEQKNFQKQPGRFFPLDIDYGVNKQVTKKNKKDADSKLAPPLLELMKMLFNVETYRVAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLLSNNNPNPSVRESLLIDASNRFFTVIPSIHPHIIKDEEDFKSKVKMLESLQEIEIASRLVGFDIDGDDSIDDKYKKLHCDISPLPRDSEDYRLIEKFLRTTHAPTHAEWSLELEEVFALEREGEFDKYAPYREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMKNPVGLMLLSEVALGNISELKNAKVSLEYSGLIPIKVPDESEFVRWRDDVIVPCGKPVPSRVKTSELMYNEFIVYNTAQVKMQFLLKGDEGSHFGIVGGDGDEVFVGALNAQDAICGLHVSCAKLTLLTDVDDIMKMISNSGNGGSASPCGACKFLRRKCAADCIFAPYFCSEQGPSSFAAIHKVFGASNVSKLLLNLPAHDRCEAVITIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSMENNNEVYWGRNNGYGQTMNPMYGTSYTNMNPISPQSSLDSIDYSRIHDNGSMMSSLQQEGFSVQQQARSRKSPSYDSNDLSELQELALRMMRN 1665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1465 1665 MobiDBLite consensus disorder prediction 672 686 - -
Lele07g1465 1665 MobiDBLite consensus disorder prediction 669 703 - -
Lele07g1465 1665 MobiDBLite consensus disorder prediction 308 335 - -
Lele07g1465 1665 FunFam Poly [ADP-ribose] polymerase 846 948 - -
Lele07g1465 1665 Pfam BRCA1 C Terminus (BRCT) domain 859 926 IPR001357 -
Lele07g1465 1665 Gene3D - 1079 1223 IPR036616 GO:0003950
Lele07g1465 1665 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 571 657 IPR001510 GO:0003677|GO:0008270
Lele07g1465 1665 CDD WGR_PARP1_like 969 1074 - -
Lele07g1465 1665 Gene3D - 149 296 IPR011989 -
Lele07g1465 1665 ProSiteProfiles LOB domain profile. 1465 1567 IPR004883 -
Lele07g1465 1665 Coils Coil 691 718 - -
Lele07g1465 1665 SMART WGR_cls 979 1062 IPR008893 -
Lele07g1465 1665 SMART zf_PARP_3 574 654 IPR001510 GO:0003677|GO:0008270
Lele07g1465 1665 Pfam Lateral organ boundaries (LOB) domain 1466 1564 IPR004883 -
Lele07g1465 1665 SMART BRCT_7 851 929 IPR001357 -
Lele07g1465 1665 ProSiteProfiles PARP alpha-helical domain profile. 1089 1207 IPR004102 GO:0003950
Lele07g1465 1665 Pfam PADR1 (NUC008) domain 748 797 IPR012982 -
Lele07g1465 1665 Gene3D - 684 757 - -
Lele07g1465 1665 ProSiteProfiles BRCT domain profile. 848 939 IPR001357 -
Lele07g1465 1665 FunFam Deoxyhypusine hydroxylase 151 292 - -
Lele07g1465 1665 Gene3D - 1319 1406 - -
Lele07g1465 1665 PANTHER DNA LIGASE 629 1404 - -
Lele07g1465 1665 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 1090 1224 IPR036616 GO:0003950
Lele07g1465 1665 ProSiteProfiles PARP catalytic domain profile. 1214 1414 IPR012317 GO:0003950
Lele07g1465 1665 FunFam Poly [ADP-ribose] polymerase 1082 1223 - -
Lele07g1465 1665 Pfam Poly(ADP-ribose) polymerase, regulatory domain 1090 1219 IPR004102 GO:0003950
Lele07g1465 1665 Pfam HEAT repeats 198 278 - -
Lele07g1465 1665 ProSiteProfiles WGR domain profile. 968 1067 IPR008893 -
Lele07g1465 1665 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 569 666 - -
Lele07g1465 1665 MobiDBLite consensus disorder prediction 1598 1650 - -
Lele07g1465 1665 SMART E-Z type HEAT repeats 238 267 IPR004155 -
Lele07g1465 1665 SMART E-Z type HEAT repeats 174 203 IPR004155 -
Lele07g1465 1665 SMART E-Z type HEAT repeats 80 109 IPR004155 -
Lele07g1465 1665 SMART E-Z type HEAT repeats 205 234 IPR004155 -
Lele07g1465 1665 SMART E-Z type HEAT repeats 16 45 IPR004155 -
Lele07g1465 1665 Coils Coil 1546 1573 - -
Lele07g1465 1665 Gene3D BRCT domain 844 947 IPR036420 -
Lele07g1465 1665 SUPERFAMILY WGR domain-like 947 1072 IPR036930 -
Lele07g1465 1665 Gene3D - 758 818 IPR038650 -
Lele07g1465 1665 Gene3D - 564 664 IPR036957 GO:0003677|GO:0008270
Lele07g1465 1665 SMART PADR1_2 746 799 IPR012982 -
Lele07g1465 1665 SUPERFAMILY ADP-ribosylation 1223 1404 - -
Lele07g1465 1665 CDD parp_like 1090 1404 - -
Lele07g1465 1665 FunFam Poly [ADP-ribose] polymerase 683 757 - -
Lele07g1465 1665 Pfam WGR domain 980 1052 IPR008893 -
Lele07g1465 1665 Gene3D - 1224 1318 - -
Lele07g1465 1665 SUPERFAMILY ARM repeat 84 281 IPR016024 -
Lele07g1465 1665 SUPERFAMILY BRCT domain 850 939 IPR036420 -
Lele07g1465 1665 Pfam Poly(ADP-ribose) polymerase catalytic domain 1234 1317 IPR012317 GO:0003950
Lele07g1465 1665 Pfam Poly(ADP-ribose) polymerase catalytic domain 1318 1404 IPR012317 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1465 Lele-ChrLele07 8921373 8940479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1465 1455 1665 AS2 family AT2G42430 54.065 1.27e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele07g1465 PARP_reg 1.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1404 05 8882404 8885392 Lele07g1465 07 8921373 8940479 hybridization
Lele06g1264 06 8060734 8064464 Lele07g1465 07 8921373 8940479 hybridization