Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1460 ATGAGCTCCTCAAATGCCAAGCCTTTGCCCTTTAAGTCTAAGAAGCCCCATGTCTGTCATTCAGCTTCCAAATCCCAATCATCAGATCCCATTTCGTTGAGCTCCAAAACTCCAGAGAAGGCCTCACAGCTCTCACACCGTACCCGAAACCGGGGTGTTGCGCTCTCCATTAGAGAAGTCAGGAAAGTCGCTGAAAGCCTCCAGGAACAGAAAGGCCAGCGGCAATATAATGATCGTACGGAGGAGATCAAGTCCGCCCGAAGGAAGATTGCACCGTCTTTGGCCGAAATGTCCCCCCGCAAATCCAAGGAATCTGTGGATGAGCCCATCAAGCTGCCGGAAAAGTATGAAATTTTGGGCGAGTTCTTTGACAGCTTGGATAGCTCGATCCGATTGTTGCACTTGAAAGGTTCCTCAACAACTTTCACGAATATCTGCCCCAAAATTGAATGTTTAACTGATAGGAGATTTACGCACAGTCATCTGGCCCAGTTGAAATATATCTTTCCTGAGGCACTTGTTATAAAGAAGGTGCTCAGGTTGGATGAACGAACAAGCTGTATGAAGCCAGACCTCCATCTTTCATTAAATCCCGATTCAAAGTTGTTTTCTGAAGGTGGAAGCGTGTCCTTGCGAAAGTTATTTCGCACAAGGTTAAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCAGAAAAAATGCTGCCTGAGCTATTCAGTCACCGTAAGCAAGATCGTCCTTTAGAAACATTGAGAACTACCTCATCATCTGCTGCAATACCATCAAATGATGCTGTTGCACCTCATCACGGAGCTGCAGGACCTGCATCCATGCAAGATAATGCCATTGTAATCAATTCAGAGCCTGCTAAGGGTAAAGAAAACTTGTCAATTCCTGTTAACACTTCAATTGGAGCACATCATCAACAACCAGCTTTAGCCACTCACATGTCTCAATCTTTTAAAAGAAGGTTTTCTCAGAAATCTGTAAAAGATCAAGCAGATGATGTGCAACAAAAGTCACCATCAGGTTCGTTACCTCCTCAATCTGTCCCAGTTTCAGAATCAAGAGTGAAGAAAAATTCATCAAGTGTAGACACTAGTATGTGCCCAACAATATGTGCTTCTCCGGCTAATCTCAAATCATCTGGTTCTTCAGTTGCCACTCCAAATAAAGTTGCTTCTACTCCATCTAGGCTGATGATTCATACACCTTCATTGCCAACGCCTAAGAGATGTTACATGAGCCTGGATGACAGCTCTTGCAGCTCACCAAACAAATTGGTTAGGCGTCCAACTAGTTTGAAGAAGTCATTGAACTTTGACACTCCAGTGAAAAATCGGAGGACAGAGAATGAAGCTGATGATGCTGGTGGCTTATCAAGTGATGATGCTGGTGGCTTATCAAGTGATGATGATATTTTTGATATTCTGCCGGAGAGTCTTCTCCAATCGATTAAAGAAAAGGAGAGAGTGGCAATGGATGAAAGAAATCCGGCAATCTCACAAGCAAAAAGACGGCAAAAAATGATCGCCTGCCTTCCTAAGCTATATAACATGATTCATCTCTTGATTCATTCAATGAATCGTTCTGTTGTCACAAAAGAGGAGCTTCTAAGCAAGATAATCTCAAACCATTGTGATATTGTTGACCGGAGAGAAGTTGAAGAGCAGCTAAATTTGTTGCTAGAACTAGTTCCAGAATGGATTTCTGAAAAGTTGGCATCTAGTGGAGATCTGCTCTTCTGCATAAATAAAATGCAGAACCCCGAGACCATACGATCACAGCTTGCAGAAGCAAAGTGGGCTTGA 1818 0.4307 MSSSNAKPLPFKSKKPHVCHSASKSQSSDPISLSSKTPEKASQLSHRTRNRGVALSIREVRKVAESLQEQKGQRQYNDRTEEIKSARRKIAPSLAEMSPRKSKESVDEPIKLPEKYEILGEFFDSLDSSIRLLHLKGSSTTFTNICPKIECLTDRRFTHSHLAQLKYIFPEALVIKKVLRLDERTSCMKPDLHLSLNPDSKLFSEGGSVSLRKLFRTRLRDFYESHPEVDEIPEKMLPELFSHRKQDRPLETLRTTSSSAAIPSNDAVAPHHGAAGPASMQDNAIVINSEPAKGKENLSIPVNTSIGAHHQQPALATHMSQSFKRRFSQKSVKDQADDVQQKSPSGSLPPQSVPVSESRVKKNSSSVDTSMCPTICASPANLKSSGSSVATPNKVASTPSRLMIHTPSLPTPKRCYMSLDDSSCSSPNKLVRRPTSLKKSLNFDTPVKNRRTENEADDAGGLSSDDAGGLSSDDDIFDILPESLLQSIKEKERVAMDERNPAISQAKRRQKMIACLPKLYNMIHLLIHSMNRSVVTKEELLSKIISNHCDIVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQNPETIRSQLAEAKWA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1460 605 MobiDBLite consensus disorder prediction 20 41 - -
Lele07g1460 605 CDD Cdt1_m 98 238 IPR014939 -
Lele07g1460 605 SUPERFAMILY "Winged helix" DNA-binding domain 103 240 IPR036390 -
Lele07g1460 605 FunFam CDT1-like protein a chloroplastic 473 603 - -
Lele07g1460 605 Gene3D - 472 603 IPR038090 -
Lele07g1460 605 Pfam DNA replication factor CDT1 like 112 198 IPR014939 -
Lele07g1460 605 PANTHER DNA REPLICATION FACTOR CDT1 14 603 IPR045173 GO:0003677|GO:0030174|GO:0071163
Lele07g1460 605 SMART CDT1_2 112 239 IPR014939 -
Lele07g1460 605 MobiDBLite consensus disorder prediction 1 56 - -
Lele07g1460 605 CDD Cdt1_c 479 600 IPR032054 -
Lele07g1460 605 MobiDBLite consensus disorder prediction 309 326 - -
Lele07g1460 605 Pfam DNA replication factor Cdt1 C-terminal domain 483 575 IPR032054 -
Lele07g1460 605 MobiDBLite consensus disorder prediction 444 458 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 42 56 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 245 280 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 420 470 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 420 443 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 309 372 - -
Lele07g1460 605 MobiDBLite consensus disorder prediction 338 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1460 Lele-ChrLele07 8878551 8881450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1460 5 601 Core DNA Replication Machinery Family AT2G31270 42.414 1.80e-116 357