Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1453 ATGGTTGATGAGGTGACCTTGACTGCGCCATTTAGCCATCGCCACTTTCTGATTCGCGGATCCAAATTCGTTGAACTCTGCCAACAATCTCCATCATGCTTCCTCCTCGACGTTGATAACTACCCTTCCATTGAATCTACAACAATGGAACGGTCGCCAAGGAAAACGGCTAAGCAAGATGAACCAAAAGAGACTAAGCACAGAGGAGTACGGAGGCGGCCATGGGGGAAATTCGCGGCGGAGATTCGAGATTCGAACAGGCACGGAGCTCGATTGTGGCTGGGCACTTTCAACACGGCAGAAGAAGCGGCGAGAGCCTACGATCGTGCGGCGTTTGGGATGAGAGGGCATTCGGCCATTCTCAACTTCCCAGACGAATATGATATGAGCAACGTGGGGAGTGGTGGTTCTAGTGGGAGCCACCTGCATCGATCTTCATCGTCGTCTGCTTCGTCGTCGTCTTCAATGGCCGAAGCTCAGGGGGGGAGACAGGAGGTGTTCGAGTTCCAGTGTTTGGATGATCAATTACTAGAAGACCTTCTCGATTACACCGCCAAGAAGAAAGAGTGA 570 0.5193 MVDEVTLTAPFSHRHFLIRGSKFVELCQQSPSCFLLDVDNYPSIESTTMERSPRKTAKQDEPKETKHRGVRRRPWGKFAAEIRDSNRHGARLWLGTFNTAEEAARAYDRAAFGMRGHSAILNFPDEYDMSNVGSGGSSGSHLHRSSSSSASSSSSMAEAQGGRQEVFEFQCLDDQLLEDLLDYTAKKKE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1453 189 PANTHER DNA-BINDING DOMAIN 53 180 IPR044808 GO:0003700|GO:0009873
Lele07g1453 189 SUPERFAMILY DNA-binding domain 66 126 IPR016177 GO:0003677
Lele07g1453 189 MobiDBLite consensus disorder prediction 132 160 - -
Lele07g1453 189 MobiDBLite consensus disorder prediction 46 71 - -
Lele07g1453 189 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 ProSiteProfiles AP2/ERF domain profile. 66 124 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 MobiDBLite consensus disorder prediction 51 71 - -
Lele07g1453 189 SMART rav1_2 66 130 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 FunFam Ethylene-responsive transcription factor 2 66 125 - -
Lele07g1453 189 Pfam AP2 domain 65 117 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele07g1453 189 MobiDBLite consensus disorder prediction 132 161 - -
Lele07g1453 189 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1453 Lele-ChrLele07 8846781 8847438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1453 63 188 AP2-EREBP Transcription Factor Family AT3G23230 60.317 2.97e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1453 AP2 1.2e-15 CL0081