Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1452 ATGAGTGCAACACTGTCTTCTCCGTCCTATCAGCAACCATGCCCAGATTGGAAGTTCTGGCAGGAGCCCTCTGATACTTTCTTGGTCTCTCTGTCAAGCAACCAAGCGCAAGAAGACCCTTTTCACGATTATCTTTGCTTCGATATGATTGACAAGAAGGAAAATCAACCGCCGGTGACTTGGGAAGCCATAGAAGCCGGCGAGACTGTCAAGGAAAGATCATACATAGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGCACCAGAGTTTGGCTAGGTACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACACCGCTGTTCTTAATTTTCCGGTCGAAAAGGTGAAGGAGTCTCTGCAACACATCGAGTATGGTTGCCGCAAAGGGTGTTCGCCGGCTTTAGCCCTAAAAGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGCCAAGAAAGTCAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCTTATCTGATCAAACTGCAAGCCCTAGCTAG 624 0.4888 MSATLSSPSYQQPCPDWKFWQEPSDTFLVSLSSNQAQEDPFHDYLCFDMIDKKENQPPVTWEAIEAGETVKERSYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFTMRGNTAVLNFPVEKVKESLQHIEYGCRKGCSPALALKERHYIQRKLSSKAKKVKAKQQSEVVVLEDLGVEYLEQLLSLSDQTASPS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1452 207 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Lele07g1452 207 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Lele07g1452 207 FunFam Ethylene-responsive transcription factor 2 73 134 - -
Lele07g1452 207 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Lele07g1452 207 PANTHER DNA-BINDING DOMAIN 57 200 IPR044808 GO:0003700|GO:0009873
Lele07g1452 207 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Lele07g1452 207 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
Lele07g1452 207 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Lele07g1452 207 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Lele07g1452 207 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1452 Lele-ChrLele07 8829552 8830175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1452 72 205 AP2-EREBP Transcription Factor Family AT3G23240 58.993 8.89e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1452 AP2 9.4e-15 CL0081