Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1450 ATGTCTTCTCCGTCCTATCAGCAACCATGCCCAGATCGGGAGTTCTGGCAGGAGACCTCTGATACTTTCTTGGTCTCTCTGTCAAGCGACCAACTTCACCAAGACCCTTCCCCCGATTATCTCTGCTTCGATATGATTGACAAGGACACAAATCAACCGCCTGTGACTTGGGAAGCCATAGAAGCCGGCGAGACTGTCAAGGAAAGATCATACATAGGGGTGAGGAAGAGACCCTGGGGCAAATTTGCAGCAGAGATCAGAGACAACAGCAGGAATGGCGCCAGGGTTTGGCTGGGAACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAGCACCGCTGTTCTTAATTTTCCTGTGGAAAAGGTGAATGAGTCTCTGCAACACATCAAGTACGGCTGCCGCAAAGGGTGTTCGCCGGCTTAA 453 0.5143 MSSPSYQQPCPDREFWQETSDTFLVSLSSDQLHQDPSPDYLCFDMIDKDTNQPPVTWEAIEAGETVKERSYIGVRKRPWGKFAAEIRDNSRNGARVWLGTFESAEEAALAYDQAAFTMRGSTAVLNFPVEKVNESLQHIKYGCRKGCSPA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1450 150 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Lele07g1450 150 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Lele07g1450 150 PANTHER DNA-BINDING DOMAIN 60 133 IPR044808 GO:0003700|GO:0009873
Lele07g1450 150 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
Lele07g1450 150 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Lele07g1450 150 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Lele07g1450 150 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Lele07g1450 150 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Lele07g1450 150 Pfam AP2 domain 71 120 IPR001471 GO:0003700|GO:0006355
Lele07g1450 150 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1450 Lele-ChrLele07 8800081 8800533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1450 32 150 AP2-EREBP Transcription Factor Family AT3G23240 55.645 1.92e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1450 AP2 1.6e-15 CL0081