Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1428 ATGGGTCTGAGAGACATTGGAGCTTCGCTACCACCTGGGTTTCGGTTTTATCCGAGTGATGAAGAATTGGTGTGTCATTATCTCTACAAAAAGATCTCAAACGAGGAAGCTCTCAAGGGTACTTTGGTCGAAATTGACTTGCATACGTGCGAGCCCTGGCAGCTTCCTGAGGTGGCTAAGCTGAACGCGAATGAGTGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCGACGGGTTTCAGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCGACGGGGAAGGATCGGACGGTGGTGGATCCGATCACAAGAGAGGTTGTGGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCACAAGAACCAATCAGATAACAACAACAACAACAATATCATCAATGCAAAACTCATGTTGGACTCAACAATATCAGATCTGGCTTCTTCATCTTCTCCTACCAACCATAATACCATCCCTCTCCTCTCCTACAACCAACTTTGCTCTTCCCCCTTCAATCTAAACCACCAGGATCACCATTCTCATAATAATTCTCTCGTCAACTTTCTTCAATTCCCTCGGGAAACAAACACCGCCGCCACAAGCACCGTAACTCACGACCAGATCAGCCCGAGAGGTGGGGGTGGTGGGGGTGGTGGGGATGATGGTGGCTATGGCTTCTTTTGGGACATGGGCCTAGAAGATAACCGCAGCTTTCACAATGGCGTCGACGCAATGAGGTCCTTCGAGGTCGATAATAATAATAATAGCATGGTCTTGTTATGA 888 0.4842 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKNQSDNNNNNNIINAKLMLDSTISDLASSSSPTNHNTIPLLSYNQLCSSPFNLNHQDHHSHNNSLVNFLQFPRETNTAATSTVTHDQISPRGGGGGGGGDDGGYGFFWDMGLEDNRSFHNGVDAMRSFEVDNNNNSMVLL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1428 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 212 - -
Lele07g1428 295 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele07g1428 295 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
Lele07g1428 295 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele07g1428 295 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1428 Lele-ChrLele07 8660878 8664385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1428 6 214 NAC Transcription Factor Family AT1G56010 48.848 1.77e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g1428 NAM 1.2e-37 No_clan