Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1407 ATGAAGTGCCTATGTTCAGGGGAGCAGTTAAGAGGAGCAGACGAAATGGTTCCTTCATCTGAATCTCATGCATCCAAGGATTATTCAGTGAGTGGGGATTCTTTCACAGCTGTAGAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGGGAGAGTGGTTACTTGAACTACGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTTCAGAAAGGCAACATTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATAGGTGCCGTGACTCCTAAAATTAAAATTTCCCTTGCCCAAAGGACAGAACAAACTAAGAGACAGAAGAGACATGCCCAGCATAATGCTGCACCCCCGATATCAATACATGCTGTTGGACTACTGTTGGAAGCTGTACTCCTGAAAGCAAAATCGTTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCTGAAGGTTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGGACTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTGTGTCTTATAGGAGGGCGCTCCTTCATGGATGGAATCTTGATGCAGAGTCAACAGCAAAGATTCAGAAAGAGTTTGTCATATTTCTTCTATATAGTGGGGGGGAAGCAAGCCCCCCAAATCTCCGTTCTCAAATGGACAGCTCATTTGTGCCCAGAAACAATATAGAAGAGGCTATACTTCTTTTGATGATTTTGGTAAGAAAAGTCACTTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTAGCTAATCAATTGAAAGAATTGCTCCCTGGGACTGTCAACCGAAGAGAAAGGTATTTTACTCTGGCTCTCTGTTATTTTGGAGCTGGAAAGGACTTGATGGCACTGGATCTTCTCAAAATGGTGTTGAGTAGTAAAGAGGACCCTAAACATATTCCCGCTTTGTTAATGGCATCTAAAATATGTTCTAAGAACCCTAGTCTTGCAGAAGAAGGGGTAAGCTTTGGTTCCAGAGTGCTTGAGAGCTTGGGTGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCTTACTTGGCGTTTCACATTCAGCAAATTCGAAATTAGTCATTTCTGATTCTGAGAGGTTTGAAAGGCAATCTGAGGCACTTTGTGCTTTGGAAACTGCCGGCAAAATGACCCGAATGAGAGACCACAATGTATTATACTATCTAAGTTTAGAATATGCGGAACAGAGGAAGTTGGATGCTGCACTTTATTGTGCAAAATGCCTTCTAAAACTGGAAGCGGGGTCTAATGTCAAAGGGTGGCTGTTGTTAGCTCGAATATTATCAGCCCAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGAAAATGGGATCAAGGGGATCTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAGTGCCATTGAGACATATACTCAACTTCTTGCTGTTTTTCAAGTTCAAAAGAAAACATTTGGTTCTGGGAAGAAGCTATATATGGAGAAGAGAGATCATGCTAGTAACCTGGAAGTCGAAGTATGGCATGATCTTGCCTATGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTACTCTGCTTCTAGATGTCATACAACAGGACTGCTGTATGAAGCAAAGGGTCTTTACAAAGAGGCTTTAAAGGCTTTTAATGATGCTTTGAAGATTGATCCCAATTATGCCCCAAGCTTGATTTCCAGTGCCATGGTTCTGAGATGGTGCAGTAGTAGTAAGGAATCAAATGCTGTAGTGAGAAGCTTTCTGATGGATGCACTGCGCCATGATAGATTGAATGCGGGTGCATGGTATAATCTTGGCCTTGTTCACAGGGATGAGGGCACAGTCTCGTCATTAATGGAAGCTGCGGAATGTTTCAAGGCTGCTCATTTTCTTGAAGAAACTTCGCCCGTTGAACCTTTCAGATGA 2157 0.4186 MKCLCSGEQLRGADEMVPSSESHASKDYSVSGDSFTAVEVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNIEAALHVFEGIDIGAVTPKIKISLAQRTEQTKRQKRHAQHNAAPPISIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPGLWKLADCPREAIVSYRRALLHGWNLDAESTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANQLKELLPGTVNRRERYFTLALCYFGAGKDLMALDLLKMVLSSKEDPKHIPALLMASKICSKNPSLAEEGVSFGSRVLESLGDRCDKLESVANCLLGVSHSANSKLVISDSERFERQSEALCALETAGKMTRMRDHNVLYYLSLEYAEQRKLDAALYCAKCLLKLEAGSNVKGWLLLARILSAQKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETYTQLLAVFQVQKKTFGSGKKLYMEKRDHASNLEVEVWHDLAYVYISLSQWHDAEMCLSKSKAIKLYSASRCHTTGLLYEAKGLYKEALKAFNDALKIDPNYAPSLISSAMVLRWCSSSKESNAVVRSFLMDALRHDRLNAGAWYNLGLVHRDEGTVSSLMEAAECFKAAHFLEETSPVEPFR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1407 718 Gene3D Tetratricopeptide repeat domain 46 550 IPR011990 GO:0005515
Lele07g1407 718 SUPERFAMILY TPR-like 142 542 IPR011990 GO:0005515
Lele07g1407 718 ProSiteProfiles TPR repeat profile. 604 637 IPR019734 GO:0005515
Lele07g1407 718 Pfam Tetratricopeptide repeat 451 507 - -
Lele07g1407 718 Gene3D Tetratricopeptide repeat domain 554 714 IPR011990 GO:0005515
Lele07g1407 718 SMART tpr_5 136 169 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 514 547 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 478 511 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 604 637 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 321 354 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 570 603 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 443 476 IPR019734 GO:0005515
Lele07g1407 718 SMART tpr_5 676 712 IPR019734 GO:0005515
Lele07g1407 718 MobiDBLite consensus disorder prediction 11 32 - -
Lele07g1407 718 Pfam Tetratricopeptide repeat 607 637 IPR013105 -
Lele07g1407 718 SUPERFAMILY TPR-like 515 690 IPR011990 GO:0005515
Lele07g1407 718 PANTHER PROTEIN NPG1 1 718 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1407 Lele-ChrLele07 8545899 8550525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1407 1 718 Calmodulin-binding Proteins AT4G28600 57.005 0.0 778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2368 13 29372247 29372995 Lele07g1407 07 8545899 8550525 CCT
Lele14g2297 14 27700061 27710881 Lele07g1407 07 8545899 8550525 CCT
Lele15g0052 15 314036 318275 Lele07g1407 07 8545899 8550525 CCT
Lele16g0054 16 349118 355066 Lele07g1407 07 8545899 8550525 CCT
Lele07g1407 07 8545899 8550525 Lele07g1407 07 8545899 8550525 ECH
Lele05g1349 05 8470778 8475811 Lele07g1407 07 8545899 8550525 hybridization
Lele06g1211 06 7609311 7617306 Lele07g1407 07 8545899 8550525 hybridization