Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1401 ATGCAAAAGCTTGTCATGAAGACACCATATGTTGCGATAGGCATGAGAACCTTTCCAAAAGCTCCTCCTTTTCTCTTTTTTCTACTCTTACTATTCTTTCTTCCATTGCAGATCATTGCTTCTCCTAGAACTGAAGCAGAAACTCTTATCAAATGGAAAACAAGTCTCTCTCTTCCTCTTGCTGATTTTCTCAATTCATGGTCCCTCGCCAACCTCGACAATATCTGCAGTTGGGAAGCCATTGTTTGTGATGATACTAACACAACAATCTCAGAGATAGATCTCTCTAATGCAAACCTCACTGGGACACTTGAAGAGTTGGATTTTTCTTCTCTTCCAAATCTCTCCCTCTTCAACCTCAATACCAACAGTTTCAGTGGGTCAATTCCTTCTGCAATTGGTAACCTCTCCAAGATCCGTTTCTTGGACCTGGGATTAAACTTCTTTGAAGGAACACTTCCTTCTGAACTGGGTCAGCTAAAGGAGCTTCAATATCTTAGTGTTTACTTCAACTATCTCAACGGTACTATTCCTTATCAGCTCACAAATCTTCCAAAGGTATGGTACCTAGACCTTGGTTTCAACTTCTTTATATCTCCTGCTGATTGGTCATATTATTCAGGAATGCCATCCTTAACCCACCTTAGTTTGACGCTCAATTCTTTAACTTCTGAATTCCCAAGTTTCATACTGGAATGTCAGAACTTGACATACCTTGACATCTCTCAGAATCACATGTCTGGCCTAATACCCAAATCCATGCATACTAATCTGGGTAAGCTTGAATATCTCAATCTCACCAATTGTGGGCTAGAAGGACCTCTGTCATCAAATTTGTTCAAGCTCTCTACTCTAAAAGAACTTCGCTTGGGGAATAACAAGTTTTCTGGTCCTATTCCCAGAGAGTTAGGATTGATGTCTGGACTTCAAGTACTTGAATTGAATAACAATTCAATCATAGGGGAAATTCCTACCTCACTAGGAAATCTCAGGGATCTAGTGATGCTTGATCTCCATAATAATTTTTTGAATTCTACCATACCTTCTGAGCTTGGCTTCTGTACTAATCTAACCTTCCTGAGTTTGGCGATAAATAATTTGACTGGTCCTTTGCCTTTGTCATTATCTAAATTGCCCAAAATAACAAAATTGGGGTTATCCGAAAATTCTTTTTCTGGCCAGCTTTCTTCTTTGTTGGTTTCCAATTGGACTGAGTTGGACTCTTTGCAACTTCAACACAATAAATTCACAGGAGAGATCCCGCCAGAGATTGGCTTGTTGACAAAAGTCACATACTTGTATCTGTATAATAATGAGTTCTTTGGTCCCATTCCTCATGAGATTGGAAACTTGAAAGTATTGATGGAATTAGACCTTTCAGCAAACCAATTCTCAGGGCCAATTCCGTCAACTATTTGGACTCTTACAAACATGACCCTCATAAATCTTTTCTCCAATAAACTCTCTGGAAACATTGCCATGGATATTGGAAACTTGACCTCTCTACAAGTTTTCGATGTTGACACTAATTATTTGCACGGAGAGTTACCAGAGACTATTTCTCAGCTAACTGAGTTACAGTACTTTTCTGTATTCTCCAATAATTTTTCAGGCAACATTCCTAAGAATTTTGGGAAGTATAGTCCTTCTTTGAGTCGTGTCAGTTTCTCAAACAATAGCTTCTCTGGAGAACTACCAAGTGATTTGTGCAGTGGTTTCAATATAACACTTTTGACTCTGAACAACAACAGCTTTTCTGGGCAAGTTCCAAACTGCTTGAGAAATTGTTCGAAACTAGTTAGAGTTCGTCTTGATGGAAATCAATTCACAGGAAACATCACAGAAGTATTTGGAGTTCATCCCAGTCTTGCCGTTGTCTCATTGAGTGGCAATCAGTTTTTTGGCGAGCTCTCTCCTTTGTGGGGTGAATGCTTAAACTTAAGCAGGATAGAAATTGACAGAAATAAACTTTCGGGTAAAATTCCACCTGAACTAAGTAAGTTGAGCCGATTGCAATATTTAAGCCTGTCCTCCAATGAATTGACTGGCCATATCCCACCTGAAATGGGCAATCTTAGCCAGCTTTACATGTTCAACTTGAGCAAGAACCATTTGACAGGGCAGATTCCAGAGAGTATTGCCAGATTAGCTCATCTTAATTATCTTGATTTATCAGATAACAGCTTCACTGGAAGCATACCGAAAGAGCTTGGTAACCACGATGGCTTAAAGAGCTTGAATTTAAGTTACAACAATCTAGCTGGGGAGATACCATCTGAGCTTGGCAACCTGTTCTCGCTCCAATACCTCTTGGATCTCAGTAGCAACTCTCTTTCAGGGCCAATTCCTCAGAACCTTGAGAAGCTCATTTCTTTGATGATACTCAATCTTTCACATAACCATCTTTCAGGGACAATCCCACAAACTTTTCCAAGTATGTTGAGCCTCCAATCTATTGATTTTTCTTATAATAATTTGACGGGTCCAATCCCAACTGGGGGCATTTTCAAAACAACACCTGCTAAAGCTTATGCTGGAAACTCAGTATGTGGGGAAGGAAATGGATTAACTGCTTGCTCTACAGCATCTACCCCAGACAAGTCCAAAGGGCTACACAAAAAGGTTCTTCTTGGGATTATTCTACCAGTTTGTGGGCTATTAATCATAGGGATAATCGGATTCCTAATGTTCCGTAGGCAGGCCAAAACCCTTGACGAGGAGACCAAAGATAGTGAAAAGAATGAAAACTCCATATCCACCGTATGGGAAAGAGATGGAAAGTTCACATTTGCTGAAATTGTCAAGGTAACCGACGATTTCAATGAGAGGTACTGCATAGGAAAAGGAGGATTCGGAAGGGTTTATAGAGCGGCATTACCAACAGGTCTAGTTGTAGCAGTTAAAAGGCTCAATATCTCAGACTCCAGTGACATTCCAACAGTGAATCGCCAAAGTTTTGAGAATGAAATAAGAACACTTACCGAAGTGAGGCACCGCAACATCATCAAGTTTTATGGGTTCTGTTCCAGCAAGGGACGCTTGTACTTGGTGTATGAATATATGAACAGAGGCAGTCTGGGCAAAGTGTTATACGGGGAAGAAGGTAAATTAGAACTAGAGTGGTCTATAAGGATAAGAATTATACAGGGAATAGCACATTCAATTGACTACCTTCACAGTGATTGTTCCCCGCCGGTAGTTCACCGGGATGTAACGGTCAACAACATATTATTGGACTCAGATTTTGAACCTCGCCTTGCAGATTTTGGCACTGCAAAGCTACTCAGCTACAATTCAACAACCTGGACCTCGGTTGCTGGATCCTATGGTTACATGGCTCCAGGTATCTATCAATCAACGTACTCTTATTCTTCAATTGTTTCAATTTCAATGCATATCCAATTACCACCTCGGCATGTAAAATTATGGTTCCTGACAAATTTAAAACCTGCAGAGCTAGCACAAACCATGAGAGTCACGGAGAAATGCGATGTGTACAGCTTTGGAGTGGTGGCGTTAGAGATAGTGATGGGGAAGCACCCAGGGGATCTCCTAACTTCGATGTCTTCGATGAAGTTTATGTCGTCAATGGAGGATTCAGAGATGCTTCTGGAGGATGTGCTGGATCAGAGGCTACCACCTCCAAGAGGCAAATTAAGTGAAGCAATAGGGTTCATAGTGACAATAGGGTTGGCCTGCACGCGTAACAATCCAGAGTCGAGACCCGCGATGCGTTCTGTGGCACAAGAACTTTCAGTTAAGACGAAAGTTGTCTTGGAGGGCCGTTTGGGACGAGAACCAAAAGCAAGTTAA 3813 0.4102 MQKLVMKTPYVAIGMRTFPKAPPFLFFLLLLFFLPLQIIASPRTEAETLIKWKTSLSLPLADFLNSWSLANLDNICSWEAIVCDDTNTTISEIDLSNANLTGTLEELDFSSLPNLSLFNLNTNSFSGSIPSAIGNLSKIRFLDLGLNFFEGTLPSELGQLKELQYLSVYFNYLNGTIPYQLTNLPKVWYLDLGFNFFISPADWSYYSGMPSLTHLSLTLNSLTSEFPSFILECQNLTYLDISQNHMSGLIPKSMHTNLGKLEYLNLTNCGLEGPLSSNLFKLSTLKELRLGNNKFSGPIPRELGLMSGLQVLELNNNSIIGEIPTSLGNLRDLVMLDLHNNFLNSTIPSELGFCTNLTFLSLAINNLTGPLPLSLSKLPKITKLGLSENSFSGQLSSLLVSNWTELDSLQLQHNKFTGEIPPEIGLLTKVTYLYLYNNEFFGPIPHEIGNLKVLMELDLSANQFSGPIPSTIWTLTNMTLINLFSNKLSGNIAMDIGNLTSLQVFDVDTNYLHGELPETISQLTELQYFSVFSNNFSGNIPKNFGKYSPSLSRVSFSNNSFSGELPSDLCSGFNITLLTLNNNSFSGQVPNCLRNCSKLVRVRLDGNQFTGNITEVFGVHPSLAVVSLSGNQFFGELSPLWGECLNLSRIEIDRNKLSGKIPPELSKLSRLQYLSLSSNELTGHIPPEMGNLSQLYMFNLSKNHLTGQIPESIARLAHLNYLDLSDNSFTGSIPKELGNHDGLKSLNLSYNNLAGEIPSELGNLFSLQYLLDLSSNSLSGPIPQNLEKLISLMILNLSHNHLSGTIPQTFPSMLSLQSIDFSYNNLTGPIPTGGIFKTTPAKAYAGNSVCGEGNGLTACSTASTPDKSKGLHKKVLLGIILPVCGLLIIGIIGFLMFRRQAKTLDEETKDSEKNENSISTVWERDGKFTFAEIVKVTDDFNERYCIGKGGFGRVYRAALPTGLVVAVKRLNISDSSDIPTVNRQSFENEIRTLTEVRHRNIIKFYGFCSSKGRLYLVYEYMNRGSLGKVLYGEEGKLELEWSIRIRIIQGIAHSIDYLHSDCSPPVVHRDVTVNNILLDSDFEPRLADFGTAKLLSYNSTTWTSVAGSYGYMAPGIYQSTYSYSSIVSISMHIQLPPRHVKLWFLTNLKPAELAQTMRVTEKCDVYSFGVVALEIVMGKHPGDLLTSMSSMKFMSSMEDSEMLLEDVLDQRLPPPRGKLSEAIGFIVTIGLACTRNNPESRPAMRSVAQELSVKTKVVLEGRLGREPKAS 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1401 1270 Pfam Protein tyrosine and serine/threonine kinase 1150 1251 IPR001245 GO:0004672|GO:0006468
Lele07g1401 1270 SUPERFAMILY RNI-like 92 399 - -
Lele07g1401 1270 FunFam Nuclear pore complex protein NUP107 42 201 - -
Lele07g1401 1270 Pfam Leucine rich repeat N-terminal domain 44 84 IPR013210 -
Lele07g1401 1270 Pfam Leucine rich repeat 694 753 IPR001611 GO:0005515
Lele07g1401 1270 Pfam Leucine rich repeat 210 271 IPR001611 GO:0005515
Lele07g1401 1270 Pfam Protein kinase domain 945 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1401 1270 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1066 1078 IPR008266 GO:0004672|GO:0006468
Lele07g1401 1270 Gene3D Ribonuclease Inhibitor 397 495 IPR032675 -
Lele07g1401 1270 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 447 544 - -
Lele07g1401 1270 SMART LRR_typ_2 112 136 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 668 692 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 306 329 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 330 354 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 499 523 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 716 740 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 258 282 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 789 812 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 209 233 IPR003591 -
Lele07g1401 1270 SMART LRR_typ_2 451 475 IPR003591 -
Lele07g1401 1270 Gene3D Transferase(Phosphotransferase) domain 1 1021 1260 - -
Lele07g1401 1270 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 767 1245 - -
Lele07g1401 1270 ProSiteProfiles Protein kinase domain profile. 940 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1401 1270 SUPERFAMILY RNI-like 534 830 - -
Lele07g1401 1270 ProSitePatterns Protein kinases ATP-binding region signature. 946 968 IPR017441 GO:0005524
Lele07g1401 1270 Gene3D Ribonuclease Inhibitor 302 396 IPR032675 -
Lele07g1401 1270 Gene3D Ribonuclease Inhibitor 203 301 IPR032675 -
Lele07g1401 1270 Gene3D Ribonuclease Inhibitor 42 202 IPR032675 -
Lele07g1401 1270 FunFam MDIS1-interacting receptor like kinase 2 207 400 - -
Lele07g1401 1270 Gene3D Phosphorylase Kinase; domain 1 900 1020 - -
Lele07g1401 1270 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 548 863 - -
Lele07g1401 1270 Gene3D Ribonuclease Inhibitor 496 862 IPR032675 -
Lele07g1401 1270 FunFam Leucine-rich repeat receptor protein kinase MSP1 903 1020 - -
Lele07g1401 1270 SUPERFAMILY Protein kinase-like (PK-like) 917 1251 IPR011009 -
Lele07g1401 1270 SUPERFAMILY RNI-like 323 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1401 Lele-ChrLele07 8516818 8520630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1401 39 686 Receptor kinase-like Gene Family AT4G08850 32.923 7.90e-89 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele07g1401 Pkinase 2.7e-35 CL0016