Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1383 ATGGCTATCTCGCAATTGCTCCATAAAATCTCCTTTTCATCATTGCCATCAAGATCGCCGAACTCCCTTTTGACAACGATCATAGGATTGCCCGTTTTGGAACTAGCCGCAATCTGCGTCAACTTAACTATTCTTCTTGTGTTTCTCCTTGTAATCTCAGCGAGGCGGATATTTGTGTGTGTTGGTCGAATTCGAATAAGCAAGGAAAACACGACTGGCGATCCAAATCCAATTCGTCGTAGTCATATCGACATAAACACACACGAAGTTAGAATCGGTACGAGTTTCAAATTGGCATTGCTCTGTTGTTTCTATGTGCTCTTCCTTCAAGTTCTGGTGTTAGGATTTGATGCAGCTGCTTTGATCAGAGAATCAACTGATGGGAACACTGTGAACTGGGGGCTTCTTTCTTTGCCATCCGTTCAGGGTTTAGCTTGGTTTGTTATCAGCTTCTCCGCTTTGCATTGCAAAATCAACATTTCTGAGAAGTTCCCGTTTTTGTTGAGGATTTGGTGGTTGGTATCACTTGTAATTTGCTTGTGCACTTTGTACCTTGATGCAAGAGAACTTGTGGTAGAAGGTTCAAAACATCTTTCTTCTCATGTTGTGGCGAATTTTGCTGCCACTCCAGCTCTTGCTTTTCTGTGCATTGTTGCAATTCGAGGTGGTACTGGCATAAAAGTTCGTAGAAACTCTGATCTCCAAGAGCCATTACTTGCTGAAGAAGAAGAAGAATCAGGTTGTCTCAATGTTACTCCATATAGTGATGCCGGGATTTTTAGCTTGGCCACTCTCTCTTGGCTTAACCCGCTTCTCTCAATTGGGGCTAAGAGACCGCTTGAGCTTAAGGACATTCCCCTTCTTGCGCTAAAAGATCGAGCTAAGACAAATTATAGGATTTTGAACTCTAACTGGGAGAGATTGAAGGCTGAAAATCCTTCAAAGAAGCCTTCATTAGCTTGGGCAACTCTCAAGTCTTACTGGAAGGAGGCAGCTTGTAATGCCATCTTTGCTGGCATACAAATGAAAGTGAAAAGGGGTATGCGTGTGGCTGTTTGCGGCATGGTTGGTTCTGGGAAATCAAGTTTCCTCTCCTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGAGTGTGTGGTTCAGAAGCATATGTCTCCCAATCTGCATGGATACAGTCAGGAAACATTGAAGAAAATATCCTTTTTGGAAGCCCCATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTTTTCTCTCATGGAGACCAAACAATTATAGGCGATAGGGGTATAAACTTGAGTGGAGGCCAGAAACAGCGGGTGCAGCTTGCACGAGCTCTTTATCAAGATGCTGATATTTATCTCCTTGATGACCCCTTCAGTGCAGTTGATGCTCACACTGGATCAGAACTGTTTAACGAATACATATTGACAGCACTAGCAGATAAAACAGTTATTTTTGTGACCCATCAAGTGGAATTTCTCCCCTCAGCTGATTTGATACTGGTACTTAAAGAAGGCCGCATCATACAGGCTGGAAAATATGATGATCTTTTACAAGCAGGCACAGATTTTAAAACTCTAGTTTCGGCTCATCATGAAGCCATTGAGGCTATGGATATTCCTAATCACTCAGAAGATTCAGATGAAAATGTGTCCTTGGAGGCATCTGTTATGGCCAGTAAAACGTCCATTATATCTGCAAATGATATCGAAAGTCTAGCAAAGGAAGTGCAAGAGGGTTCATCAGTTTCAGATCTGAAAGCAATTAAGGAGAAGAAGAAAGCGAAACGCTCAAGGAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTAAGAGGTAGAGTCAGCATGAGGGTGTACTGGTCATACATGGCTGCAGCATATAAGGGCTTACTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTTCTCCAAATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAAAGTAACTCCTATGGTTCTTCTTCTGGTGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCAGCTGCACAGAAACTTTTTATAAAGATGCTTCGAAGTGTTTTCCTTGCACCGATGTCTTTCTTTGACTCCACACCAGCTGGAAGGATCTTGAATCGTGTATCGATTGATCAGAGTGTTGTGGACCTTGACATTCCTTTTAGACTAGGAGGATTTGCTTCTACAACAATACAACTTATTGGCATTGTTGGTGTAATGACAAAGGTTACCTGGCAAGTTTTGCTTCTGGTTGTCCCAATGGCTGTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCTTCAAGGGAGCTGGTTCGTATAGTAAGCATCCAGAAATCTCCAGTTATACATCTGTTTGGTGAATCAATTGCTGGAGCAGCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGAAACCTCTATCTGCTGGACTCTTTTGCGCGGCCATTCTTCTGCAGTCTTGCAGCTATTGAGTGGCTCTGCTTGCGTATGGAATTATTGTCAACCTTTGTATTTGCTTTCTGCATGATATTACTAGTGAGCTTTCCACATGGAAGTATTGACCCGAGCATGGCTGGACTTGCTGTGACGTATGGCTTGAATTTAAATGCACGTCTATCGCGGTGGATTCTTAGCTTTTGCAAACTTGAGAATAAAATAATTTCTATTGAAAGGATTTATCAATACAGCCAAATTCCTAGTGAAGCACGAACTATTATTGAAGACACTCGCCCTCCATCCACATGGCCTGAGAATGGAACTATCAGTATAATTGATTTGAAGGTTCGTTACAAGGAGAATCTTCCATTGGTGCTTCACGGAATATCATGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGTACTGGCAGCGGCAAATCTACTTTGATACAAGCATTGTTTCGATTGGTTGAACCATCAAGTGGAAGTATCCTTATTGACGACATTAATATTTCAAGCATGGGTCTTCATGACCTTCGAAGCCGTCTCAGTATCATACCTCAAGATCCAACCTTATTTGAAGGGACTATACGAGGCAATCTTGATCCTCTTGAAGAGCACTCTGATAAAGAGATTTGGGAGGCACTAGATAAGTCTCAGCTCGGAGAGATTATTCGTCAGAAAGAGGAAAAGCTTGATACACAAGTGCTTGAAAATGGAGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGGCGGGCTTTATTGAAGCAGTCAAGGATACTTGTACTTGATGAGGCAACAGCATCAGTTGATACAGCCACTGATAATCTTATACAAAAGATTATTCGGACAGAGTTTAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGCGATCTTGTTCTGGTCCTCAGCGATGGTCGAGTGGCAGAGTTTGACACGCCATTGCGACTATTAGAGGATAAGTCCTCCATGTTTCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA 3630 0.4262 MAISQLLHKISFSSLPSRSPNSLLTTIIGLPVLELAAICVNLTILLVFLLVISARRIFVCVGRIRISKENTTGDPNPIRRSHIDINTHEVRIGTSFKLALLCCFYVLFLQVLVLGFDAAALIRESTDGNTVNWGLLSLPSVQGLAWFVISFSALHCKINISEKFPFLLRIWWLVSLVICLCTLYLDARELVVEGSKHLSSHVVANFAATPALAFLCIVAIRGGTGIKVRRNSDLQEPLLAEEEEESGCLNVTPYSDAGIFSLATLSWLNPLLSIGAKRPLELKDIPLLALKDRAKTNYRILNSNWERLKAENPSKKPSLAWATLKSYWKEAACNAIFAGIQMKVKRGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSEAYVSQSAWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFNEYILTALADKTVIFVTHQVEFLPSADLILVLKEGRIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNHSEDSDENVSLEASVMASKTSIISANDIESLAKEVQEGSSVSDLKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYWSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKVTPMVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFIKMLRSVFLAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTKVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEARTIIEDTRPPSTWPENGTISIIDLKVRYKENLPLVLHGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSSGSILIDDINISSMGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIRQKEEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGIPDF 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1383 1209 Coils Coil 598 621 - -
Lele07g1383 1209 Pfam ABC transporter 339 471 IPR003439 GO:0005524
Lele07g1383 1209 ProSitePatterns ABC transporters family signature. 444 458 IPR017871 GO:0005524|GO:0016887
Lele07g1383 1209 Gene3D - 289 566 IPR027417 -
Lele07g1383 1209 SUPERFAMILY ABC transporter transmembrane region 631 943 IPR036640 GO:0005524|GO:0016020
Lele07g1383 1209 Coils Coil 291 311 - -
Lele07g1383 1209 Pfam ABC transporter transmembrane region 646 888 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1383 1209 FunFam ABC transporter C family member 5 607 944 - -
Lele07g1383 1209 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 336 - -
Lele07g1383 1209 FunFam ABC transporter C family member 5 318 551 - -
Lele07g1383 1209 CDD ABCC_MRP_domain1 318 519 - -
Lele07g1383 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 541 IPR027417 -
Lele07g1383 1209 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 646 916 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1383 1209 FunFam ABC transporter C family member 3 946 1198 - -
Lele07g1383 1209 SMART AAA_5 346 527 IPR003593 -
Lele07g1383 1209 SMART AAA_5 989 1174 IPR003593 -
Lele07g1383 1209 Gene3D ABC transporter type 1, transmembrane domain 605 944 IPR036640 GO:0005524|GO:0016020
Lele07g1383 1209 Gene3D - 946 1199 IPR027417 -
Lele07g1383 1209 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 322 542 IPR003439 GO:0005524
Lele07g1383 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 953 1192 IPR027417 -
Lele07g1383 1209 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 963 1197 IPR003439 GO:0005524
Lele07g1383 1209 CDD ABC_6TM_ABCC_D2 644 938 IPR044726 GO:0140359
Lele07g1383 1209 Pfam ABC transporter 980 1128 IPR003439 GO:0005524
Lele07g1383 1209 CDD ABCC_MRP_domain2 961 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1383 Lele-ChrLele07 8419885 8426354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1383 336 535 Calmodulin-binding Proteins AT2G36910 31.481 1.03e-20 97.1