Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1373 ATGCACCAGTGGATCGGCATCAAGATTCAAGGACGTTGTATTCAATCGCGGTCTGGGCGCGTGCCCACCGGCAGTGACAAGCGCCGCTTATGGCGCCTCATAAAGTTTGATTTTTTGTATGATTTTCGACATCATTGGGACTGTGTTTTTTTTTTCTGCAAGATCCTTCCTTTTGAGCCCAGGAGTACAGAGTCTGGAAGTAGATCTGAAGCAGCTCGAGATTTTGATCTGTTCAGTCTCCTTGGAAATGGTTTTAGTGATCAAGGATTTGGCGGTTCTTCCTGTAGCTTCATTGCTCTTTCTAATTCGCTTATATGGAACTGGAGTCTTGTGGCCACCATTTCTGTGGGAATTAAAACAGAGGATTTGACATCACCTTTAGTTCACGAACTTTTTAATTTCACGCTGTCGTTTTGGATGTTCAGAGGAATTGATGATTCTAAAGATTATATTGCAACAAAGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGATGCCATTTTCCGAGTGGTTGCTGCAATTTTGCATCTTGGAAATATTGAATTTGCAAAAGGGGAGGAAATAGACTCATCTATGCCCAAAGATGAAAAATCTCAATTTCATCTACAAACTGCTGCTGAGCTTTTCCAGTGTGATGCAAAAGCACTAGAAGATTCTCTTTGCAAACGTGCCATTGTTACTCGTGATGAAACAATCACAAAGTCACTGGATCCAGAAACTGCTGCACTCAGCTGA 744 0.4207 MHQWIGIKIQGRCIQSRSGRVPTGSDKRRLWRLIKFDFLYDFRHHWDCVFFFCKILPFEPRSTESGSRSEAARDFDLFSLLGNGFSDQGFGGSSCSFIALSNSLIWNWSLVATISVGIKTEDLTSPLVHELFNFTLSFWMFRGIDDSKDYIATKRAMDVVGISSEEQDAIFRVVAAILHLGNIEFAKGEEIDSSMPKDEKSQFHLQTAAELFQCDAKALEDSLCKRAIVTRDETITKSLDPETAALS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1373 247 PANTHER MYOSIN 142 245 - -
Lele07g1373 247 Pfam Myosin head (motor domain) 141 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele07g1373 247 Gene3D Myosin VI head, motor domain, U50 subdomain 163 247 - -
Lele07g1373 247 ProSiteProfiles Myosin motor domain profile. 143 247 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele07g1373 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1373 Lele-ChrLele07 8348832 8352681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1373 139 246 Myosins gene family AT1G04600 76.852 1.27e-51 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1882 13 26642505 26644258 Lele07g1373 07 8348832 8352681 CCT
Lele14g1818 14 24989906 24991096 Lele07g1373 07 8348832 8352681 CCT
Lele15g0528 15 3088651 3089759 Lele07g1373 07 8348832 8352681 CCT
Lele07g1373 07 8348832 8352681 Lele07g1373 07 8348832 8352681 ECH