Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1356 ATGGCCGGCGAAGGAGAGGGTCCTGCTATTGGAATAGATCTTGGTACGACGTACTCTTGCGTCGGAGTCTGGCAACATGACCGCGTCGAGATTATTGCCAACGATAACCGGACTACGCCGTCTTACGTCGCGTTCACTGACTCCGAGCGTTTGATCGGTGATGCAGCCAAGAACCAGGTAGCCATGAACCCCATCAACACCGTCTTTGATGCCAAGAGGTTGATTGGTCGTAGATTCAGTGACACCTCTGTCCAAGATGACATTAAGTTGTGGCCTTTCAAGGTCATTTCTGGTCCTGCTGAAAAGCCCATGATCTCAGTCAACTACAAGGGTGAAGAGAAACGATTCTCTGCGGAAGAAATATCTTCAATGGTTCTGATGAAGATGCGTGAGATTGCTGAGGCCTACCTTGGCTCCACAATCAAGAACGCTGTTGTTACTGTCCCTGCTTATTTTAATGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGCCTAAATGTCATGAGAATTATTAACGAGCCTACCGCTGCTGCCATTGCCTATGGCCTTGACAAGAAGGCAACGAGTTTTGGCGAGAAGAATGTGTTGATTTTTGATCTCGGTGGTGGTACTTTTGATGTTTCTTTACTCACTATCGAGGGGGGTATCTTTGAGGTGAAAGCCACAGCTGGGGACACTCATCTTGGAGGCGAGGATTTTGATAACAGGATGGTTAACCGCTTTGTGCAGGAATTCAAGAGAAAGAACAAGAAGGACATCAGTGGCAACCCCAGAGCACTTAGGAAGTTGAGGACTGCCTGTGAGAGGGCTAAAAGAACGCTATCTTCCACTGCTCAGACTACCATTGAAATTGATTATTTGTTTGAAGGAATTGATTTATATGCCCCTATTACTCGTGCCAGATTTGAGGAGCTTAACATGGACCTCTTCAGAAAGTGCATGGAACCAGTTGAAAAATGTTTAAGGGATGCTAAGATGGACAAGAGGAGTGTGCATGATGTTGTTCTTGTCGGTGGATCCACTAGAATCCCTAAAGTTCAGCAACTTCTCCAAGACTTCTTTAATGGAAAGGAGCTCTGCAAGAGCATCAATCCTGACGAAGCTGTGGCGTATGGTGCTGCTGTCCAGGCTACCATCTTAAGCGGTGAAGGCAATGAGACGGTCCAGGATCTTCTGCTCTTGGATGTAACCCCACTCTCACTTGGTTTGGAGACTGCTGGTGGGGTGATGACTGTGTTGATCCCCAGAAACACTACTATCCCAAAAGAGAAGGAGCAGGTTTTCTCAACCTATTCTGACAACCAACCAGGTGTGTTGATCCAAGTCTATGAAGGTGAGAGGACCCGAACCCAGGACAACAACTTGCTGGGTAAGTTTGAACTGTCTGGCATCCCCCCTGCTCCTAGAGGAGTCCCACAAATTACAGTGTGCTTTGACATTGATGCCAATGGTATCCTGAATGTCTCCGCTGAGGATAAAATTATCGGCCAAAAGAACAAAATCACTATCACAAACGATAAGGGCAGATTGTCAAAGGAAGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAGGATGCAGAGCACAAGAAGAAGGCAGAAGCTAAGAATGCGCTGGAGAACTACGCATACAACATGAGGAACACCGTGAGGGATGAGAAAATCGGAGGGAAACTTGATCCAGCTGACAAGAAAAAGATCGATGATGCCATTGAGCAAGCTATCAACTGGCTGGAGGGCAACCAGCTTGCAGAGGCAGATGAGTTTGAAGATAAGATGAAGGAATTGGAGAGCATTTGCAAGCCCATCATCGCCAAGATGTACTAG 1848 0.4681 MAGEGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDTSVQDDIKLWPFKVISGPAEKPMISVNYKGEEKRFSAEEISSMVLMKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSFGEKNVLIFDLGGGTFDVSLLTIEGGIFEVKATAGDTHLGGEDFDNRMVNRFVQEFKRKNKKDISGNPRALRKLRTACERAKRTLSSTAQTTIEIDYLFEGIDLYAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQATILSGEGNETVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPKEKEQVFSTYSDNQPGVLIQVYEGERTRTQDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKIIGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDAEHKKKAEAKNALENYAYNMRNTVRDEKIGGKLDPADKKKIDDAIEQAINWLEGNQLAEADEFEDKMKELESICKPIIAKMY 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 207 217 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 8 21 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 394 413 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 34 46 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 335 351 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 144 164 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 367 387 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 475 491 - -
Lele07g1356 615 PRINTS 70kDa heat shock protein signature 56 64 - -
Lele07g1356 615 SUPERFAMILY Actin-like ATPase domain 8 189 IPR043129 -
Lele07g1356 615 Gene3D - 10 381 - -
Lele07g1356 615 FunFam Heat shock protein 70 10 194 - -
Lele07g1356 615 Gene3D - 190 364 - -
Lele07g1356 615 FunFam Heat shock cognate 70 kDa protein 2 317 364 - -
Lele07g1356 615 FunFam Heat shock 70 kDa protein 69 124 - -
Lele07g1356 615 Gene3D - 69 124 - -
Lele07g1356 615 Gene3D Actin; Chain A, domain 4 233 316 - -
Lele07g1356 615 ProSitePatterns Heat shock hsp70 proteins family signature 3. 338 352 IPR018181 -
Lele07g1356 615 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 541 615 IPR029048 -
Lele07g1356 615 FunFam Heat shock 70 kDa protein 195 258 - -
Lele07g1356 615 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 542 IPR029047 -
Lele07g1356 615 FunFam Heat shock 70 kDa 389 543 - -
Lele07g1356 615 SUPERFAMILY Actin-like ATPase domain 196 386 IPR043129 -
Lele07g1356 615 Coils Coil 519 539 - -
Lele07g1356 615 Gene3D - 543 615 IPR029048 -
Lele07g1356 615 PANTHER HEAT SHOCK PROTEIN 70KDA 9 581 IPR013126 GO:0005524|GO:0140662
Lele07g1356 615 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lele07g1356 615 FunFam heat shock cognate 70 kDa protein-like 543 615 - -
Lele07g1356 615 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 547 IPR029047 -
Lele07g1356 615 FunFam Heat shock 70 kDa 233 316 - -
Lele07g1356 615 Pfam Hsp70 protein 9 615 IPR013126 GO:0005524|GO:0140662
Lele07g1356 615 CDD HSPA1-2_6-8-like_NBD 9 385 - -
Lele07g1356 615 ProSitePatterns Heat shock hsp70 proteins family signature 2. 201 214 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1356 Lele-ChrLele07 8176497 8178706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1356 1 615 Calmodulin-binding Proteins AT3G12580 90.924 0.0 1159