LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g1320	ATGAAAAGCATCTGCTTTCGCCCCAAGACGCCTTCCTTCTCCACCATGACCAGATCTAATCACTCATCGCTATCCTCAAACCCGAGCTCCTCTCCGGCGATGAGCCTTCCTGAATCCAGCATAGACCGCTGCATTGAGGCAGCCCAAGCCTTGATCCACAAGTGGAACCCGGAAACTTCTGCCTACGCCAACATCACTTCCCTCTTCTACGACGACAAATCTGAGGCCATGCACTTCATCAAATGCGTCAACCAGCTCCACAAGGCAATGCATCTTCTCCACTCCCTCCAGACTCCACTCCACTCCCAGAAGCTAGTTCTCGCCAACAGCTTGATGCAGATGGCCATGAAGAGGCTTCAGAAGGAGTTCTACCAAATCCTCTCCGTCAATCGGGCCTTCTTAGACCCCGAATCACTCTCCACCATCAGTAGAACATCCACCTCCGTCAGTTCCACCATTTCCGATTTCGATGTCGAAGATGCTACTGCACCGGAGGACGACGTCCGAACTGCCGGTGATTCTATCTCTGAATTGGAACTTATCTCTTCGCTCGCCACCAAGGATCTCAGGTCTATAGCCAAGTGTATGATCTCTTGCGGATATACGAGAGAATGTTTGAAGGTCTATAAGGTCATTCGAAAATCCATCATCGATGAAGGCATTTATAGGTTGAACTTGGATAAATTGAAGCCTTTCCAAGTTAATAAGATGGATTGGCCGGTTCTTGATTTGAAAATCAAGATGTGGTTAGAGGCCGTGAAGGTTGCAGTGAGGACGCTCTTCAACGGAGAGAGAAAGTTGTGCGATGATGTCTTCGCCACATCGGATTCCATCAGAGAGAGTTGCTTCGCCTATATTTCCAGAGACGGAGCCACTATTCTATTAGCATTCCCCCAACACGTCGTCTCCAAAATTAAGAACTCGCCGCCGGACAAGATCTTTCGGGTGCTTGAAATGTACATTATGTTAACTTCACTATCGCCGGAGATCCAATCCATCTTCTCTTTCTACTCGACCTCCGAAATTTTAAATCAAGTCAACAATTCTCTGCTTCGGCTCAGCGAGTCCGTTCGAACGACGCTCTCTGAATTCGAGTCCACGATCCAAAAGGACACATCCAAGTCGTCGGTAAAATCGGGCGGAGTTCACCCGCTGACCATACAAGCTATGGACTACCTCTCAATCCTCTCGGATTACAGTAACGTCCTAACTGAGATATTCACTGACTGGAATCTACCACCAAAATCGCCTGTGCCAGAATGTTTATCAGAAAGTCCAGATTCCGATGAAGAGTCGTCATCGACTCCATCGTACTCCTCTAGAATAGCTTGGCTGATTTTCGTTCTTAACTGTAAGCTCGACAGCAAAACAAAGCATTGCAAGGACGCTTCATCGTCGTACCTATTTCTGGCAAACAATCTCCAGCACGTGATAGACACAGTGCGAAACTCGAACTTGCAGTACGTGCTGGGTGACGAGTGGATCGGGAAGCACGAAGCGAAGTTGAAGGGATTCGTGAGTAAGTACGAGAAGTTGGGGTGGGGCGGAGTGACTTCGTGCTTGCCGAGAAATCCAAAGGAGGGGATGACGGCGGAAGAGGCGAGGGACATATTCAGGAACTTCAACTTCCGTTTTGAGGAGGCATACCGGAAACAGATTTATTCACTGTACAGGACAGGAGATTCAGAGAGGAGATCAGAGAATCGATAG	1710	0.4842	MKSICFRPKTPSFSTMTRSNHSSLSSNPSSSPAMSLPESSIDRCIEAAQALIHKWNPETSAYANITSLFYDDKSEAMHFIKCVNQLHKAMHLLHSLQTPLHSQKLVLANSLMQMAMKRLQKEFYQILSVNRAFLDPESLSTISRTSTSVSSTISDFDVEDATAPEDDVRTAGDSISELELISSLATKDLRSIAKCMISCGYTRECLKVYKVIRKSIIDEGIYRLNLDKLKPFQVNKMDWPVLDLKIKMWLEAVKVAVRTLFNGERKLCDDVFATSDSIRESCFAYISRDGATILLAFPQHVVSKIKNSPPDKIFRVLEMYIMLTSLSPEIQSIFSFYSTSEILNQVNNSLLRLSESVRTTLSEFESTIQKDTSKSSVKSGGVHPLTIQAMDYLSILSDYSNVLTEIFTDWNLPPKSPVPECLSESPDSDEESSSTPSYSSRIAWLIFVLNCKLDSKTKHCKDASSSYLFLANNLQHVIDTVRNSNLQYVLGDEWIGKHEAKLKGFVSKYEKLGWGGVTSCLPRNPKEGMTAEEARDIFRNFNFRFEEAYRKQIYSLYRTGDSERRSENR	569

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g1320	569	MobiDBLite	consensus disorder prediction	1	37	-	-
	Lele07g1320	569	Pfam	Exo70 exocyst complex subunit	248	552	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Lele07g1320	569	Gene3D	Exocyst complex component Exo70	60	567	-	-
	Lele07g1320	569	MobiDBLite	consensus disorder prediction	8	37	-	-
	Lele07g1320	569	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	38	552	IPR004140	GO:0000145\|GO:0006887
	Lele07g1320	569	SUPERFAMILY	Cullin repeat-like	73	552	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g1320	Lele-ChrLele07	7966350	7968059	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g1320	35	552	EXO70 exocyst subunit family	AT3G09520	50.383	4.31e-166	484