Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1319 ATGCTTCCGCCAAATTCTGTTAAAATACTGAATCGGGAGACATGTTTTGCTGCAAACCCGTTACAACCAAAGGGTCCAAATCGTCAGATTGTTTCTTGTTCAACGAGTCATCGCCCCAAGGGGCGGAATCTTCTCCAGCGGGGGCTCATGGATCTCAAAAAAGCAGCCGTCCTCAACAGTACTCCCTCTGAACCCCCCACACCCACCACCCCTCGTCCCACTCTCTTCCTCTCCTCTTCCGGCAAGGCCCTCCTCGTTTCCAACTCCGGTAAATCTCTCCAGGTTTCCAATTCCAATAAATCCATTCTCTCCAATTCCAGCAAGCGTTTCGACAAGAAAAAGTACGTCAAGCAGGTCACCGGCCGCCACAATGACACCGAGCTTCACCTCGCCGCTCAGCGTGGCGACGTCGCCGCCATTCGCCACATTTTGGGAGAAATCGATGCCCAGATGATCGGAACCCCTTGTGGAGCCGATTTTGATGCGGAGCTCGAAGAAATTAGGTCTGCCATTTTCAATGAGGTCAACGAATTGGGGGAGACGGCTTTGTTTGTTGCAGCCGAGCGGGGCCACATCGACGTCGTGAAGGAGCTTCTGCCCCATGCCACCAGCGAGGCCCTTTCCTTGAAAAATCAATCCGGCTTCGATCCCTTACATATTGCTGCTAGCCATGGTCACCTAGCCATTGTTCAGCTGTTACTGGACCATGATCCTGGGCTAATAAATACATTGGGACAATCAAATGCAACTCCTCTCATATCAGCAGCTACGAAAGGGCATGTAGATGTTGTTGATCTGTTGTTATCACGAGATCCTAGACAGGTGGAGTTATCTAGGTCCAATGGAAAGAATGCCCTCCATTTTGCTGCTCGTCAGGGACATGCTTGTATTGTAAAATCATTACTCAAAAAGGATCCACAACTTACTCGAAGGACTGATAAGAAAGGGCAGACTCCGCTGCATATGGCTGTAAAGGGGGTTAGCTGTGAAGTAGTGAAGTTGCTTCTTAATGCAGATCCAGCAACTGTTGCTCTACCTGACAAGTTTAACAATACTGCATTACATATTGCCACCAGGAAGAAGAGGGCAGAGATAGTGAGTGAGCTATTACTTCATTCTGAAACCAATGTCAATGCTCTGACAAGGGACCGTAAAACATCTCTTGACATTGCCGAAGGACTCCCTCCATCTGAGGAAATCCTAGAGATAAGAGATTGCCTGGTTCGTAGCGGTGGGGTTAAAGCCAGTGATCTAATTAACCAACCAAGGGATGAGCTAAGGAGGACCGTGACACAGATTAGGAAGGAGGTCCATATTCAGCTCGAACAAACTCGAAAGACAAACAGAAACGTGGATGGGATTGCCAAGGAGCTACGCAAGCTGCACAGAGCGGGGATCAACAATGCTACCAACTCAGTTACAGTGGTTGCTTCACTCTTTGCAACAGTTGCATTTTCTGCAGTTTTTGCAGTTCCTGGTGGGGATTTGGATAGTGGGGAGGCCATTATGGTGACCACTCCATCTTTCAAGATCTTCTTTATTTCTAATGCAATTTCACTCTTTACATCACTGGTTGTTGTCGTGGTTCAGATCACAGTTGTTAGAGGGGAGACAAAATCTGAAAGGAGGGTGGTGAGGGTGATTAATAAGCTGATGTGGTTAGCCTCTATTGGTACCACGATTGCATTCATTTCATCATCTTATATAGTAGTTGGTCGACGTAACATATGGGCTGCAATCTTTATTACTGTGATAGGGGGAGTGATAATGGCGAGCGTTCTTGGTGCTATGACATACTATGTGGTTAAATACAAACGTATTCGGAGGGTGAGAAAGAAAGCCAAATTTGCCAAGAAACATTCAGGTCATCATTCAGATTCAGAATCAGAAATAAATCCCATTTATGCCATTTGA 1914 0.4681 MLPPNSVKILNRETCFAANPLQPKGPNRQIVSCSTSHRPKGRNLLQRGLMDLKKAAVLNSTPSEPPTPTTPRPTLFLSSSGKALLVSNSGKSLQVSNSNKSILSNSSKRFDKKKYVKQVTGRHNDTELHLAAQRGDVAAIRHILGEIDAQMIGTPCGADFDAELEEIRSAIFNEVNELGETALFVAAERGHIDVVKELLPHATSEALSLKNQSGFDPLHIAASHGHLAIVQLLLDHDPGLINTLGQSNATPLISAATKGHVDVVDLLLSRDPRQVELSRSNGKNALHFAARQGHACIVKSLLKKDPQLTRRTDKKGQTPLHMAVKGVSCEVVKLLLNADPATVALPDKFNNTALHIATRKKRAEIVSELLLHSETNVNALTRDRKTSLDIAEGLPPSEEILEIRDCLVRSGGVKASDLINQPRDELRRTVTQIRKEVHIQLEQTRKTNRNVDGIAKELRKLHRAGINNATNSVTVVASLFATVAFSAVFAVPGGDLDSGEAIMVTTPSFKIFFISNAISLFTSLVVVVVQITVVRGETKSERRVVRVINKLMWLASIGTTIAFISSSYIVVGRRNIWAAIFITVIGGVIMASVLGAMTYYVVKYKRIRRVRKKAKFAKKHSGHHSDSESEINPIYAI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1319 637 Pfam Domain of unknown function 466 570 IPR026961 -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat profile. 178 199 IPR002110 GO:0005515
Lele07g1319 637 ProSiteProfiles Ankyrin repeat profile. 281 313 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 315 345 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 349 379 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 213 243 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 281 310 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 247 277 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 123 152 IPR002110 GO:0005515
Lele07g1319 637 SMART ANK_2a 178 207 IPR002110 GO:0005515
Lele07g1319 637 ProSiteProfiles Ankyrin repeat region circular profile. 213 236 - -
Lele07g1319 637 Pfam Ankyrin repeat 351 381 IPR002110 GO:0005515
Lele07g1319 637 FunFam Ankyrin repeat-containing protein ITN1 100 239 - -
Lele07g1319 637 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 93 619 - -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat profile. 315 337 IPR002110 GO:0005515
Lele07g1319 637 ProSiteProfiles Ankyrin repeat region circular profile. 281 304 - -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat profile. 213 236 IPR002110 GO:0005515
Lele07g1319 637 Gene3D - 90 274 IPR036770 -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat region circular profile. 315 337 - -
Lele07g1319 637 Pfam Ankyrin repeats (3 copies) 252 340 IPR002110 GO:0005515
Lele07g1319 637 Pfam Ankyrin repeats (3 copies) 128 236 IPR002110 GO:0005515
Lele07g1319 637 SUPERFAMILY Ankyrin repeat 125 392 IPR036770 -
Lele07g1319 637 MobiDBLite consensus disorder prediction 616 637 - -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat region circular profile. 178 199 - -
Lele07g1319 637 Gene3D - 275 395 IPR036770 -
Lele07g1319 637 FunFam Ankyrin repeat-containing protein ITN1 274 394 - -
Lele07g1319 637 ProSiteProfiles Ankyrin repeat profile. 349 382 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1319 Lele-ChrLele07 7961694 7964416 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1319 66 637 Miscellaneous Gene Families AT3G09550 70.447 0.0 782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1319 07 7961694 7964416 Lele13g1834 13 26351165 26355208 CCT
Lele07g1319 07 7961694 7964416 Lele14g1779 14 24745002 24746664 CCT
Lele07g1319 07 7961694 7964416 Lele15g0570 15 3375531 3385372 CCT
Lele07g1319 07 7961694 7964416 Lele16g0588 16 3306002 3307135 CCT
Lele07g1319 07 7961694 7964416 Lele08g1124 08 7052152 7058064 ECH
Lele07g1319 07 7961694 7964416 Lele07g1319 07 7961694 7964416 ECH
Lele05g1271 05 7919670 7925390 Lele07g1319 07 7961694 7964416 hybridization
Lele06g1135 06 7048135 7050431 Lele07g1319 07 7961694 7964416 hybridization